Gene : Phvul.008G047300 P. vulgaris v2.1
Defline:  (1 of 3) K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Genomic Order:  488
Name:  ? Phvul.008G047300 Secondary Identifier:  ? PAC:37160986
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G047300 0.5kb upstream 0.5kb upstream 5548 true Chr08: 4131967-4137514 Phaseolus vulgaris
Phvul.008G047300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4131967-4132466 Phaseolus vulgaris
Phvul.008G047300 0.5kb downstream 0.5kb downstream 5548 true Chr08: 4132467-4138014 Phaseolus vulgaris
Phvul.008G047300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4137515-4138014 Phaseolus vulgaris
Phvul.008G047300 1.0kb upstream 1.0kb upstream 6048 true Chr08: 4131467-4137514 Phaseolus vulgaris
Phvul.008G047300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4131467-4132466 Phaseolus vulgaris
Phvul.008G047300 1.0kb downstream 1.0kb downstream 6048 true Chr08: 4132467-4138514 Phaseolus vulgaris
Phvul.008G047300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4137515-4138514 Phaseolus vulgaris
Phvul.008G047300 2.0kb upstream 2.0kb upstream 7048 true Chr08: 4130467-4137514 Phaseolus vulgaris
Phvul.008G047300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4130467-4132466 Phaseolus vulgaris
Phvul.008G047300 2.0kb downstream 2.0kb downstream 7048 true Chr08: 4132467-4139514 Phaseolus vulgaris
Phvul.008G047300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4137515-4139514 Phaseolus vulgaris
Phvul.008G047300 5.0kb upstream 5.0kb upstream 10048 true Chr08: 4127467-4137514 Phaseolus vulgaris
Phvul.008G047300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4127467-4132466 Phaseolus vulgaris
Phvul.008G047300 5.0kb downstream 5.0kb downstream 10048 true Chr08: 4132467-4142514 Phaseolus vulgaris
Phvul.008G047300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4137515-4142514 Phaseolus vulgaris
Phvul.008G047300 10.0kb upstream 10.0kb upstream 15048 true Chr08: 4122467-4137514 Phaseolus vulgaris
Phvul.008G047300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4122467-4132466 Phaseolus vulgaris
Phvul.008G047300 10.0kb downstream 10.0kb downstream 15048 true Chr08: 4132467-4147514 Phaseolus vulgaris
Phvul.008G047300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4137515-4147514 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309312 5265 Fabidae View MSA
124069923 5270 Rosid View MSA
123753548 5271 Pentapetalae View MSA
122791603 5272 Eudicot View MSA
122042476 5273 Angiosperm View MSA
121348767 5274 Embryophyte View MSA
123425134 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.7376 0.0 249.265 High  
cufflinks 166.345 0.0 527.333 High High
cufflinks 110.659 0.0 327.422 High  
cufflinks 121.486 0.0 362.112 High  
cufflinks 133.412 0.0 405.525 High  
cufflinks 84.5258 0.0 242.236 High Low
cufflinks 81.2679 0.0 233.271 High Low
cufflinks 77.3187 0.0 220.006 High Low
cufflinks 115.491 0.0 346.803 High  
cufflinks 117.784 0.0 352.641 High  
cufflinks 135.141 0.0 414.661 High  

0 Strain