Gene : Phvul.008G048300 P. vulgaris v2.1
Defline:  (1 of 1) K02970 - small subunit ribosomal protein S21 (RP-S21, MRPS21, rpsU) Genomic Order:  498
Name:  ? Phvul.008G048300 Secondary Identifier:  ? PAC:37160453
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G048300 0.5kb upstream 0.5kb upstream 3163 true Chr08: 4241399-4244561 Phaseolus vulgaris
Phvul.008G048300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4241399-4241898 Phaseolus vulgaris
Phvul.008G048300 0.5kb downstream 0.5kb downstream 3163 true Chr08: 4241899-4245061 Phaseolus vulgaris
Phvul.008G048300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4244562-4245061 Phaseolus vulgaris
Phvul.008G048300 1.0kb upstream 1.0kb upstream 3663 true Chr08: 4240899-4244561 Phaseolus vulgaris
Phvul.008G048300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4240899-4241898 Phaseolus vulgaris
Phvul.008G048300 1.0kb downstream 1.0kb downstream 3663 true Chr08: 4241899-4245561 Phaseolus vulgaris
Phvul.008G048300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4244562-4245561 Phaseolus vulgaris
Phvul.008G048300 2.0kb upstream 2.0kb upstream 4663 true Chr08: 4239899-4244561 Phaseolus vulgaris
Phvul.008G048300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4239899-4241898 Phaseolus vulgaris
Phvul.008G048300 2.0kb downstream 2.0kb downstream 4663 true Chr08: 4241899-4246561 Phaseolus vulgaris
Phvul.008G048300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4244562-4246561 Phaseolus vulgaris
Phvul.008G048300 5.0kb upstream 5.0kb upstream 7663 true Chr08: 4236899-4244561 Phaseolus vulgaris
Phvul.008G048300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4236899-4241898 Phaseolus vulgaris
Phvul.008G048300 5.0kb downstream 5.0kb downstream 7663 true Chr08: 4241899-4249561 Phaseolus vulgaris
Phvul.008G048300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4244562-4249561 Phaseolus vulgaris
Phvul.008G048300 10.0kb upstream 10.0kb upstream 12663 true Chr08: 4231899-4244561 Phaseolus vulgaris
Phvul.008G048300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4231899-4241898 Phaseolus vulgaris
Phvul.008G048300 10.0kb downstream 10.0kb downstream 12663 true Chr08: 4241899-4254561 Phaseolus vulgaris
Phvul.008G048300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4244562-4254561 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308043 5265 Fabidae View MSA
124068112 5270 Rosid View MSA
123738375 5271 Pentapetalae View MSA
122788948 5272 Eudicot View MSA
122049752 5273 Angiosperm View MSA
121311575 5274 Embryophyte View MSA
123348853 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9882 0.0 43.9562    
cufflinks 13.0416 0.0 36.5978    
cufflinks 10.7679 0.0 30.7776    
cufflinks 24.879 0.0 66.4382   High
cufflinks 7.10576 0.0 21.468   Low
cufflinks 9.8148 0.0 28.3319    
cufflinks 8.27612 0.0 24.2969    
cufflinks 13.0248 0.0 36.4049    
cufflinks 11.4116 0.0 32.4548    
cufflinks 5.63038 0.0 17.3367   Low
cufflinks 9.20781 0.0 26.8922    

0 Strain