Gene : Phvul.008G051300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10288//PTHR10288:SF159 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  531
Name:  ? Phvul.008G051300 Secondary Identifier:  ? PAC:37160280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G051300 0.5kb upstream 0.5kb upstream 7181 true Chr08: 4519102-4526282 Phaseolus vulgaris
Phvul.008G051300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4525783-4526282 Phaseolus vulgaris
Phvul.008G051300 0.5kb downstream 0.5kb downstream 7181 true Chr08: 4518602-4525782 Phaseolus vulgaris
Phvul.008G051300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4518602-4519101 Phaseolus vulgaris
Phvul.008G051300 1.0kb upstream 1.0kb upstream 7681 true Chr08: 4519102-4526782 Phaseolus vulgaris
Phvul.008G051300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4525783-4526782 Phaseolus vulgaris
Phvul.008G051300 1.0kb downstream 1.0kb downstream 7681 true Chr08: 4518102-4525782 Phaseolus vulgaris
Phvul.008G051300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4518102-4519101 Phaseolus vulgaris
Phvul.008G051300 2.0kb upstream 2.0kb upstream 8681 true Chr08: 4519102-4527782 Phaseolus vulgaris
Phvul.008G051300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4525783-4527782 Phaseolus vulgaris
Phvul.008G051300 2.0kb downstream 2.0kb downstream 8681 true Chr08: 4517102-4525782 Phaseolus vulgaris
Phvul.008G051300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4517102-4519101 Phaseolus vulgaris
Phvul.008G051300 5.0kb upstream 5.0kb upstream 11681 true Chr08: 4519102-4530782 Phaseolus vulgaris
Phvul.008G051300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4525783-4530782 Phaseolus vulgaris
Phvul.008G051300 5.0kb downstream 5.0kb downstream 11681 true Chr08: 4514102-4525782 Phaseolus vulgaris
Phvul.008G051300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4514102-4519101 Phaseolus vulgaris
Phvul.008G051300 10.0kb upstream 10.0kb upstream 16681 true Chr08: 4519102-4535782 Phaseolus vulgaris
Phvul.008G051300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4525783-4535782 Phaseolus vulgaris
Phvul.008G051300 10.0kb downstream 10.0kb downstream 16681 true Chr08: 4509102-4525782 Phaseolus vulgaris
Phvul.008G051300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4509102-4519101 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303366 5265 Fabidae View MSA
124071830 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34059 0.0 25.7054   Low
cufflinks 7.3093 0.0 32.7685    
cufflinks 6.89159 0.0 35.2038    
cufflinks 6.38931 0.0 25.8774   Low
cufflinks 8.70774 0.0 36.9038    
cufflinks 8.08733 0.0 38.0965    
cufflinks 8.68847 0.0 40.3327    
cufflinks 9.9848 0.0 41.0738   High
cufflinks 7.57712 0.0 33.2068    
cufflinks 9.91809 0.0 41.3085   High
cufflinks 8.64992 0.0 37.6631    

0 Strain