Gene : Phvul.008G051700 P. vulgaris v2.1
Defline:  (1 of 2) K19269 - phosphoglycolate phosphatase (PGP, PGLP) Genomic Order:  535
Name:  ? Phvul.008G051700 Secondary Identifier:  ? PAC:37160033
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G051700 0.5kb upstream 0.5kb upstream 5310 true Chr08: 4562880-4568189 Phaseolus vulgaris
Phvul.008G051700 0.5kb upstream 0.5kb upstream 500 false Chr08: 4567690-4568189 Phaseolus vulgaris
Phvul.008G051700 0.5kb downstream 0.5kb downstream 5310 true Chr08: 4562380-4567689 Phaseolus vulgaris
Phvul.008G051700 0.5kb downstream 0.5kb downstream 500 false Chr08: 4562380-4562879 Phaseolus vulgaris
Phvul.008G051700 1.0kb upstream 1.0kb upstream 5810 true Chr08: 4562880-4568689 Phaseolus vulgaris
Phvul.008G051700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4567690-4568689 Phaseolus vulgaris
Phvul.008G051700 1.0kb downstream 1.0kb downstream 5810 true Chr08: 4561880-4567689 Phaseolus vulgaris
Phvul.008G051700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4561880-4562879 Phaseolus vulgaris
Phvul.008G051700 2.0kb upstream 2.0kb upstream 6810 true Chr08: 4562880-4569689 Phaseolus vulgaris
Phvul.008G051700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4567690-4569689 Phaseolus vulgaris
Phvul.008G051700 2.0kb downstream 2.0kb downstream 6810 true Chr08: 4560880-4567689 Phaseolus vulgaris
Phvul.008G051700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4560880-4562879 Phaseolus vulgaris
Phvul.008G051700 5.0kb upstream 5.0kb upstream 9810 true Chr08: 4562880-4572689 Phaseolus vulgaris
Phvul.008G051700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4567690-4572689 Phaseolus vulgaris
Phvul.008G051700 5.0kb downstream 5.0kb downstream 9810 true Chr08: 4557880-4567689 Phaseolus vulgaris
Phvul.008G051700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4557880-4562879 Phaseolus vulgaris
Phvul.008G051700 10.0kb upstream 10.0kb upstream 14810 true Chr08: 4562880-4577689 Phaseolus vulgaris
Phvul.008G051700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4567690-4577689 Phaseolus vulgaris
Phvul.008G051700 10.0kb downstream 10.0kb downstream 14810 true Chr08: 4552880-4567689 Phaseolus vulgaris
Phvul.008G051700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4552880-4562879 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302409 5265 Fabidae View MSA
124065026 5270 Rosid View MSA
123739425 5271 Pentapetalae View MSA
122788860 5272 Eudicot View MSA
122049940 5273 Angiosperm View MSA
121343932 5274 Embryophyte View MSA
123425073 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7651 0.0 69.2628    
cufflinks 23.6269 0.0 61.3662    
cufflinks 680.275 0.0 2578.79 High High
cufflinks 22.0734 0.0 57.5234    
cufflinks 33.6552 0.0 86.9935 High  
cufflinks 171.253 0.0 498.145 High High
cufflinks 4.49031 0.0 13.3396   Low
cufflinks 7.72453 0.0 21.6606    
cufflinks 2.90015 0.0 9.07948   Low
cufflinks 48.6907 0.0 126.729 High  
cufflinks 28.4427 0.0 73.6092    

0 Strain