Gene : Phvul.008G049900 P. vulgaris v2.1
Defline:  (1 of 1) KOG3444 - Uncharacterized conserved protein Genomic Order:  515
Name:  ? Phvul.008G049900 Secondary Identifier:  ? PAC:37157599
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G049900 0.5kb upstream 0.5kb upstream 3239 true Chr08: 4330422-4333660 Phaseolus vulgaris
Phvul.008G049900 0.5kb upstream 0.5kb upstream 500 false Chr08: 4330422-4330921 Phaseolus vulgaris
Phvul.008G049900 0.5kb downstream 0.5kb downstream 3239 true Chr08: 4330922-4334160 Phaseolus vulgaris
Phvul.008G049900 0.5kb downstream 0.5kb downstream 500 false Chr08: 4333661-4334160 Phaseolus vulgaris
Phvul.008G049900 1.0kb upstream 1.0kb upstream 3739 true Chr08: 4329922-4333660 Phaseolus vulgaris
Phvul.008G049900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4329922-4330921 Phaseolus vulgaris
Phvul.008G049900 1.0kb downstream 1.0kb downstream 3739 true Chr08: 4330922-4334660 Phaseolus vulgaris
Phvul.008G049900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4333661-4334660 Phaseolus vulgaris
Phvul.008G049900 2.0kb upstream 2.0kb upstream 4739 true Chr08: 4328922-4333660 Phaseolus vulgaris
Phvul.008G049900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4328922-4330921 Phaseolus vulgaris
Phvul.008G049900 2.0kb downstream 2.0kb downstream 4739 true Chr08: 4330922-4335660 Phaseolus vulgaris
Phvul.008G049900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4333661-4335660 Phaseolus vulgaris
Phvul.008G049900 5.0kb upstream 5.0kb upstream 7739 true Chr08: 4325922-4333660 Phaseolus vulgaris
Phvul.008G049900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4325922-4330921 Phaseolus vulgaris
Phvul.008G049900 5.0kb downstream 5.0kb downstream 7739 true Chr08: 4330922-4338660 Phaseolus vulgaris
Phvul.008G049900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4333661-4338660 Phaseolus vulgaris
Phvul.008G049900 10.0kb upstream 10.0kb upstream 12739 true Chr08: 4320922-4333660 Phaseolus vulgaris
Phvul.008G049900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4320922-4330921 Phaseolus vulgaris
Phvul.008G049900 10.0kb downstream 10.0kb downstream 12739 true Chr08: 4330922-4343660 Phaseolus vulgaris
Phvul.008G049900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4333661-4343660 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309038 5265 Fabidae View MSA
124061127 5270 Rosid View MSA
123749455 5271 Pentapetalae View MSA
122790156 5272 Eudicot View MSA
122051418 5273 Angiosperm View MSA
121344842 5274 Embryophyte View MSA
123424203 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2461 0.0 57.0775   High
cufflinks 19.9169 0.0 53.863    
cufflinks 15.9968 0.0 44.0427    
cufflinks 25.7222 0.0 68.4068   High
cufflinks 19.8097 0.0 53.9104    
cufflinks 12.066 0.0 34.0909   Low
cufflinks 13.5464 0.0 37.9615    
cufflinks 13.8171 0.0 38.4669    
cufflinks 15.3449 0.0 42.5877    
cufflinks 16.7671 0.0 45.9941    
cufflinks 16.0998 0.0 44.5518    

0 Strain