Gene : Phvul.008G049300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  509
Name:  ? Phvul.008G049300 Secondary Identifier:  ? PAC:37159251
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G049300 0.5kb upstream 0.5kb upstream 2172 true Chr08: 4300445-4302616 Phaseolus vulgaris
Phvul.008G049300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4300445-4300944 Phaseolus vulgaris
Phvul.008G049300 0.5kb downstream 0.5kb downstream 2172 true Chr08: 4300945-4303116 Phaseolus vulgaris
Phvul.008G049300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4302617-4303116 Phaseolus vulgaris
Phvul.008G049300 1.0kb upstream 1.0kb upstream 2672 true Chr08: 4299945-4302616 Phaseolus vulgaris
Phvul.008G049300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4299945-4300944 Phaseolus vulgaris
Phvul.008G049300 1.0kb downstream 1.0kb downstream 2672 true Chr08: 4300945-4303616 Phaseolus vulgaris
Phvul.008G049300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4302617-4303616 Phaseolus vulgaris
Phvul.008G049300 2.0kb upstream 2.0kb upstream 3672 true Chr08: 4298945-4302616 Phaseolus vulgaris
Phvul.008G049300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4298945-4300944 Phaseolus vulgaris
Phvul.008G049300 2.0kb downstream 2.0kb downstream 3672 true Chr08: 4300945-4304616 Phaseolus vulgaris
Phvul.008G049300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4302617-4304616 Phaseolus vulgaris
Phvul.008G049300 5.0kb upstream 5.0kb upstream 6672 true Chr08: 4295945-4302616 Phaseolus vulgaris
Phvul.008G049300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4295945-4300944 Phaseolus vulgaris
Phvul.008G049300 5.0kb downstream 5.0kb downstream 6672 true Chr08: 4300945-4307616 Phaseolus vulgaris
Phvul.008G049300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4302617-4307616 Phaseolus vulgaris
Phvul.008G049300 10.0kb upstream 10.0kb upstream 11672 true Chr08: 4290945-4302616 Phaseolus vulgaris
Phvul.008G049300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4290945-4300944 Phaseolus vulgaris
Phvul.008G049300 10.0kb downstream 10.0kb downstream 11672 true Chr08: 4300945-4312616 Phaseolus vulgaris
Phvul.008G049300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4302617-4312616 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311907 5265 Fabidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.3388 0.0 108.463 High  
cufflinks 77.4363 0.0 212.578 High  
cufflinks 45.023 0.0 118.167 High  
cufflinks 64.308 0.0 176.242 High  
cufflinks 118.606 0.0 350.281 High  
cufflinks 55.3441 0.0 147.735 High  
cufflinks 45.0061 0.0 119.681 High  
cufflinks 30.5034 0.0 79.096 High Low
cufflinks 53.3855 0.0 143.726 High  
cufflinks 303.023 0.0 1022.74 High High
cufflinks 116.599 0.0 340.018 High  

0 Strain