Gene : Phvul.008G049600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15615:SF28 - CYCLIN-U4-1 Genomic Order:  512
Name:  ? Phvul.008G049600 Secondary Identifier:  ? PAC:37157948
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G049600 0.5kb upstream 0.5kb upstream 2376 true Chr08: 4314308-4316683 Phaseolus vulgaris
Phvul.008G049600 0.5kb upstream 0.5kb upstream 500 false Chr08: 4314308-4314807 Phaseolus vulgaris
Phvul.008G049600 0.5kb downstream 0.5kb downstream 2376 true Chr08: 4314808-4317183 Phaseolus vulgaris
Phvul.008G049600 0.5kb downstream 0.5kb downstream 500 false Chr08: 4316684-4317183 Phaseolus vulgaris
Phvul.008G049600 1.0kb upstream 1.0kb upstream 2876 true Chr08: 4313808-4316683 Phaseolus vulgaris
Phvul.008G049600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4313808-4314807 Phaseolus vulgaris
Phvul.008G049600 1.0kb downstream 1.0kb downstream 2876 true Chr08: 4314808-4317683 Phaseolus vulgaris
Phvul.008G049600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4316684-4317683 Phaseolus vulgaris
Phvul.008G049600 2.0kb upstream 2.0kb upstream 3876 true Chr08: 4312808-4316683 Phaseolus vulgaris
Phvul.008G049600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4312808-4314807 Phaseolus vulgaris
Phvul.008G049600 2.0kb downstream 2.0kb downstream 3876 true Chr08: 4314808-4318683 Phaseolus vulgaris
Phvul.008G049600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4316684-4318683 Phaseolus vulgaris
Phvul.008G049600 5.0kb upstream 5.0kb upstream 6876 true Chr08: 4309808-4316683 Phaseolus vulgaris
Phvul.008G049600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4309808-4314807 Phaseolus vulgaris
Phvul.008G049600 5.0kb downstream 5.0kb downstream 6876 true Chr08: 4314808-4321683 Phaseolus vulgaris
Phvul.008G049600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4316684-4321683 Phaseolus vulgaris
Phvul.008G049600 10.0kb upstream 10.0kb upstream 11876 true Chr08: 4304808-4316683 Phaseolus vulgaris
Phvul.008G049600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4304808-4314807 Phaseolus vulgaris
Phvul.008G049600 10.0kb downstream 10.0kb downstream 11876 true Chr08: 4314808-4326683 Phaseolus vulgaris
Phvul.008G049600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4316684-4326683 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309500 5265 Fabidae View MSA
124073858 5270 Rosid View MSA
123743073 5271 Pentapetalae View MSA
122792546 5272 Eudicot View MSA
122043012 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.16743 0.0 22.2291    
cufflinks 4.06957 0.0 13.4923    
cufflinks 3.92427 0.0 12.992    
cufflinks 54.0997 0.0 140.525 High High
cufflinks 3.80536 0.0 12.7776    
cufflinks 7.01147 0.0 21.8558    
cufflinks 3.52584 0.0 11.9399    
cufflinks 5.09678 0.0 16.429    
cufflinks 10.4796 0.0 31.3984    
cufflinks 4.41799 0.0 14.5132    
cufflinks 4.29186 0.0 14.2598    

0 Strain