Gene : Phvul.008G053000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23151:SF66 - BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC Genomic Order:  548
Name:  ? Phvul.008G053000 Secondary Identifier:  ? PAC:37159089
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1264 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G053000 0.5kb upstream 0.5kb upstream 5334 true Chr08: 4702960-4708293 Phaseolus vulgaris
Phvul.008G053000 0.5kb upstream 0.5kb upstream 500 false Chr08: 4702960-4703459 Phaseolus vulgaris
Phvul.008G053000 0.5kb downstream 0.5kb downstream 5334 true Chr08: 4703460-4708793 Phaseolus vulgaris
Phvul.008G053000 0.5kb downstream 0.5kb downstream 500 false Chr08: 4708294-4708793 Phaseolus vulgaris
Phvul.008G053000 1.0kb upstream 1.0kb upstream 5834 true Chr08: 4702460-4708293 Phaseolus vulgaris
Phvul.008G053000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4702460-4703459 Phaseolus vulgaris
Phvul.008G053000 1.0kb downstream 1.0kb downstream 5834 true Chr08: 4703460-4709293 Phaseolus vulgaris
Phvul.008G053000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4708294-4709293 Phaseolus vulgaris
Phvul.008G053000 2.0kb upstream 2.0kb upstream 6834 true Chr08: 4701460-4708293 Phaseolus vulgaris
Phvul.008G053000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4701460-4703459 Phaseolus vulgaris
Phvul.008G053000 2.0kb downstream 2.0kb downstream 6834 true Chr08: 4703460-4710293 Phaseolus vulgaris
Phvul.008G053000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4708294-4710293 Phaseolus vulgaris
Phvul.008G053000 5.0kb upstream 5.0kb upstream 9834 true Chr08: 4698460-4708293 Phaseolus vulgaris
Phvul.008G053000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4698460-4703459 Phaseolus vulgaris
Phvul.008G053000 5.0kb downstream 5.0kb downstream 9834 true Chr08: 4703460-4713293 Phaseolus vulgaris
Phvul.008G053000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4708294-4713293 Phaseolus vulgaris
Phvul.008G053000 10.0kb upstream 10.0kb upstream 14834 true Chr08: 4693460-4708293 Phaseolus vulgaris
Phvul.008G053000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4693460-4703459 Phaseolus vulgaris
Phvul.008G053000 10.0kb downstream 10.0kb downstream 14834 true Chr08: 4703460-4718293 Phaseolus vulgaris
Phvul.008G053000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4708294-4718293 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.8863 0.0 69.9866    
cufflinks 34.4343 0.0 89.0608 High  
cufflinks 82.7537 0.0 220.281 High High
cufflinks 35.3235 0.0 91.318 High  
cufflinks 32.2255 0.0 83.4461    
cufflinks 50.4563 0.0 130.896 High High
cufflinks 16.165 0.0 43.0922   Low
cufflinks 19.1403 0.0 50.5652   Low
cufflinks 18.6785 0.0 49.31   Low
cufflinks 31.9402 0.0 82.7555    
cufflinks 30.8421 0.0 79.9274    

0 Strain