Gene : Phvul.008G053200 P. vulgaris v2.1
Defline:  (1 of 1) 2.6.1.16 - Glutamine--fructose-6-phosphate transaminase (isomerizing) / L-glutamine-D-fructose-6-phosphate amidotransferase Genomic Order:  550
Name:  ? Phvul.008G053200 Secondary Identifier:  ? PAC:37161422
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris UDPNACETYLGALSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G053200 0.5kb upstream 0.5kb upstream 5805 true Chr08: 4716266-4722070 Phaseolus vulgaris
Phvul.008G053200 0.5kb upstream 0.5kb upstream 500 false Chr08: 4721571-4722070 Phaseolus vulgaris
Phvul.008G053200 0.5kb downstream 0.5kb downstream 5805 true Chr08: 4715766-4721570 Phaseolus vulgaris
Phvul.008G053200 0.5kb downstream 0.5kb downstream 500 false Chr08: 4715766-4716265 Phaseolus vulgaris
Phvul.008G053200 1.0kb upstream 1.0kb upstream 6305 true Chr08: 4716266-4722570 Phaseolus vulgaris
Phvul.008G053200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4721571-4722570 Phaseolus vulgaris
Phvul.008G053200 1.0kb downstream 1.0kb downstream 6305 true Chr08: 4715266-4721570 Phaseolus vulgaris
Phvul.008G053200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4715266-4716265 Phaseolus vulgaris
Phvul.008G053200 2.0kb upstream 2.0kb upstream 7305 true Chr08: 4716266-4723570 Phaseolus vulgaris
Phvul.008G053200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4721571-4723570 Phaseolus vulgaris
Phvul.008G053200 2.0kb downstream 2.0kb downstream 7305 true Chr08: 4714266-4721570 Phaseolus vulgaris
Phvul.008G053200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4714266-4716265 Phaseolus vulgaris
Phvul.008G053200 5.0kb upstream 5.0kb upstream 10305 true Chr08: 4716266-4726570 Phaseolus vulgaris
Phvul.008G053200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4721571-4726570 Phaseolus vulgaris
Phvul.008G053200 5.0kb downstream 5.0kb downstream 10305 true Chr08: 4711266-4721570 Phaseolus vulgaris
Phvul.008G053200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4711266-4716265 Phaseolus vulgaris
Phvul.008G053200 10.0kb upstream 10.0kb upstream 15305 true Chr08: 4716266-4731570 Phaseolus vulgaris
Phvul.008G053200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4721571-4731570 Phaseolus vulgaris
Phvul.008G053200 10.0kb downstream 10.0kb downstream 15305 true Chr08: 4706266-4721570 Phaseolus vulgaris
Phvul.008G053200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4706266-4716265 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304752 5265 Fabidae View MSA
124061013 5270 Rosid View MSA
123739905 5271 Pentapetalae View MSA
122790507 5272 Eudicot View MSA
122044665 5273 Angiosperm View MSA
121344143 5274 Embryophyte View MSA
123424089 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42647 0.0 14.8118    
cufflinks 8.76666 0.0 23.1005    
cufflinks 6.90028 0.0 18.4709    
cufflinks 8.15951 0.0 21.6998    
cufflinks 7.10194 0.0 19.0725    
cufflinks 10.9412 0.0 28.5053    
cufflinks 11.769 0.0 30.5728    
cufflinks 8.92968 0.0 23.4461    
cufflinks 15.9507 0.0 41.2359   High
cufflinks 2.90109 0.0 8.42053   Low
cufflinks 9.623 0.0 25.2774    

0 Strain