Gene : Phvul.008G052400 P. vulgaris v2.1
Defline:  (1 of 3) K03955 - NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1 (NDUFAB1) Genomic Order:  542
Name:  ? Phvul.008G052400 Secondary Identifier:  ? PAC:37161265
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G052400 0.5kb upstream 0.5kb upstream 2255 true Chr08: 4637521-4639775 Phaseolus vulgaris
Phvul.008G052400 0.5kb upstream 0.5kb upstream 500 false Chr08: 4637521-4638020 Phaseolus vulgaris
Phvul.008G052400 0.5kb downstream 0.5kb downstream 2255 true Chr08: 4638021-4640275 Phaseolus vulgaris
Phvul.008G052400 0.5kb downstream 0.5kb downstream 500 false Chr08: 4639776-4640275 Phaseolus vulgaris
Phvul.008G052400 1.0kb upstream 1.0kb upstream 2755 true Chr08: 4637021-4639775 Phaseolus vulgaris
Phvul.008G052400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4637021-4638020 Phaseolus vulgaris
Phvul.008G052400 1.0kb downstream 1.0kb downstream 2755 true Chr08: 4638021-4640775 Phaseolus vulgaris
Phvul.008G052400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4639776-4640775 Phaseolus vulgaris
Phvul.008G052400 2.0kb upstream 2.0kb upstream 3755 true Chr08: 4636021-4639775 Phaseolus vulgaris
Phvul.008G052400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4636021-4638020 Phaseolus vulgaris
Phvul.008G052400 2.0kb downstream 2.0kb downstream 3755 true Chr08: 4638021-4641775 Phaseolus vulgaris
Phvul.008G052400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4639776-4641775 Phaseolus vulgaris
Phvul.008G052400 5.0kb upstream 5.0kb upstream 6755 true Chr08: 4633021-4639775 Phaseolus vulgaris
Phvul.008G052400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4633021-4638020 Phaseolus vulgaris
Phvul.008G052400 5.0kb downstream 5.0kb downstream 6755 true Chr08: 4638021-4644775 Phaseolus vulgaris
Phvul.008G052400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4639776-4644775 Phaseolus vulgaris
Phvul.008G052400 10.0kb upstream 10.0kb upstream 11755 true Chr08: 4628021-4639775 Phaseolus vulgaris
Phvul.008G052400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4628021-4638020 Phaseolus vulgaris
Phvul.008G052400 10.0kb downstream 10.0kb downstream 11755 true Chr08: 4638021-4649775 Phaseolus vulgaris
Phvul.008G052400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4639776-4649775 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299835 5265 Fabidae View MSA
124069611 5270 Rosid View MSA
123746919 5271 Pentapetalae View MSA
122794708 5272 Eudicot View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.428 0.0 138.246 High  
cufflinks 90.2983 0.0 234.839 High  
cufflinks 50.8198 0.0 131.599 High  
cufflinks 152.137 0.0 408.048 High High
cufflinks 87.3334 0.0 226.834 High  
cufflinks 49.7359 0.0 128.889 High  
cufflinks 43.5933 0.0 113.406 High Low
cufflinks 66.1626 0.0 171.039 High  
cufflinks 68.6228 0.0 177.403 High  
cufflinks 41.3702 0.0 107.741 High Low
cufflinks 79.0168 0.0 204.726 High  

0 Strain