Gene : Phvul.008G185600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11728:SF13 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 2, CHLOROPLASTIC Genomic Order:  1867
Name:  ? Phvul.008G185600 Secondary Identifier:  ? PAC:37160793
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6118 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G185600 0.5kb upstream 0.5kb upstream 4101 true Chr08: 52260632-52264732 Phaseolus vulgaris
Phvul.008G185600 0.5kb upstream 0.5kb upstream 500 false Chr08: 52260632-52261131 Phaseolus vulgaris
Phvul.008G185600 0.5kb downstream 0.5kb downstream 4101 true Chr08: 52261132-52265232 Phaseolus vulgaris
Phvul.008G185600 0.5kb downstream 0.5kb downstream 500 false Chr08: 52264733-52265232 Phaseolus vulgaris
Phvul.008G185600 1.0kb upstream 1.0kb upstream 4601 true Chr08: 52260132-52264732 Phaseolus vulgaris
Phvul.008G185600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52260132-52261131 Phaseolus vulgaris
Phvul.008G185600 1.0kb downstream 1.0kb downstream 4601 true Chr08: 52261132-52265732 Phaseolus vulgaris
Phvul.008G185600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52264733-52265732 Phaseolus vulgaris
Phvul.008G185600 2.0kb upstream 2.0kb upstream 5601 true Chr08: 52259132-52264732 Phaseolus vulgaris
Phvul.008G185600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52259132-52261131 Phaseolus vulgaris
Phvul.008G185600 2.0kb downstream 2.0kb downstream 5601 true Chr08: 52261132-52266732 Phaseolus vulgaris
Phvul.008G185600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52264733-52266732 Phaseolus vulgaris
Phvul.008G185600 5.0kb upstream 5.0kb upstream 8601 true Chr08: 52256132-52264732 Phaseolus vulgaris
Phvul.008G185600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52256132-52261131 Phaseolus vulgaris
Phvul.008G185600 5.0kb downstream 5.0kb downstream 8601 true Chr08: 52261132-52269732 Phaseolus vulgaris
Phvul.008G185600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52264733-52269732 Phaseolus vulgaris
Phvul.008G185600 10.0kb upstream 10.0kb upstream 13601 true Chr08: 52251132-52264732 Phaseolus vulgaris
Phvul.008G185600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52251132-52261131 Phaseolus vulgaris
Phvul.008G185600 10.0kb downstream 10.0kb downstream 13601 true Chr08: 52261132-52274732 Phaseolus vulgaris
Phvul.008G185600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52264733-52274732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303469 5265 Fabidae View MSA
124071828 5270 Rosid View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19231 0.0 7.14088    
cufflinks 2.35883 0.0 7.62991    
cufflinks 7.70821 0.0 21.8597   High
cufflinks 2.35605 0.0 7.62033    
cufflinks 2.18531 0.0 7.15236    
cufflinks 3.94819 0.0 12.0596   High
cufflinks 1.38597 0.0 4.76559    
cufflinks 1.62613 0.0 5.49048    
cufflinks 1.46924 0.0 5.02128    
cufflinks 2.48085 0.0 7.97628    
cufflinks 1.41208 0.0 4.85468    

0 Strain