Gene : Phvul.008G189000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13068:SF24 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Genomic Order:  1901
Name:  ? Phvul.008G189000 Secondary Identifier:  ? PAC:37160131
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G189000 0.5kb upstream 0.5kb upstream 2078 true Chr08: 52689919-52691996 Phaseolus vulgaris
Phvul.008G189000 0.5kb upstream 0.5kb upstream 500 false Chr08: 52691497-52691996 Phaseolus vulgaris
Phvul.008G189000 0.5kb downstream 0.5kb downstream 2078 true Chr08: 52689419-52691496 Phaseolus vulgaris
Phvul.008G189000 0.5kb downstream 0.5kb downstream 500 false Chr08: 52689419-52689918 Phaseolus vulgaris
Phvul.008G189000 1.0kb upstream 1.0kb upstream 2578 true Chr08: 52689919-52692496 Phaseolus vulgaris
Phvul.008G189000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52691497-52692496 Phaseolus vulgaris
Phvul.008G189000 1.0kb downstream 1.0kb downstream 2578 true Chr08: 52688919-52691496 Phaseolus vulgaris
Phvul.008G189000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52688919-52689918 Phaseolus vulgaris
Phvul.008G189000 2.0kb upstream 2.0kb upstream 3578 true Chr08: 52689919-52693496 Phaseolus vulgaris
Phvul.008G189000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52691497-52693496 Phaseolus vulgaris
Phvul.008G189000 2.0kb downstream 2.0kb downstream 3578 true Chr08: 52687919-52691496 Phaseolus vulgaris
Phvul.008G189000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52687919-52689918 Phaseolus vulgaris
Phvul.008G189000 5.0kb upstream 5.0kb upstream 6578 true Chr08: 52689919-52696496 Phaseolus vulgaris
Phvul.008G189000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52691497-52696496 Phaseolus vulgaris
Phvul.008G189000 5.0kb downstream 5.0kb downstream 6578 true Chr08: 52684919-52691496 Phaseolus vulgaris
Phvul.008G189000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52684919-52689918 Phaseolus vulgaris
Phvul.008G189000 10.0kb upstream 10.0kb upstream 11578 true Chr08: 52689919-52701496 Phaseolus vulgaris
Phvul.008G189000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52691497-52701496 Phaseolus vulgaris
Phvul.008G189000 10.0kb downstream 10.0kb downstream 11578 true Chr08: 52679919-52691496 Phaseolus vulgaris
Phvul.008G189000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52679919-52689918 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
122301679 5265 Fabidae View MSA
124061802 5270 Rosid View MSA
123747028 5271 Pentapetalae View MSA
122792069 5272 Eudicot View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8239 0.0 41.6222    
cufflinks 13.5389 0.0 36.0394    
cufflinks 39.3588 0.0 102.112 High High
cufflinks 13.2805 0.0 35.6281    
cufflinks 8.53189 0.0 23.754    
cufflinks 30.9937 0.0 80.1174   High
cufflinks 5.97981 0.0 17.1226   Low
cufflinks 6.92209 0.0 19.4364    
cufflinks 5.47033 0.0 15.8894   Low
cufflinks 15.2951 0.0 40.4256    
cufflinks 7.79548 0.0 21.8423    

0 Strain