Gene : Phvul.008G189300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22814:SF51 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN Genomic Order:  1904
Name:  ? Phvul.008G189300 Secondary Identifier:  ? PAC:37158469
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G189300 0.5kb upstream 0.5kb upstream 3039 true Chr08: 52746131-52749169 Phaseolus vulgaris
Phvul.008G189300 0.5kb upstream 0.5kb upstream 500 false Chr08: 52746131-52746630 Phaseolus vulgaris
Phvul.008G189300 0.5kb downstream 0.5kb downstream 3039 true Chr08: 52746631-52749669 Phaseolus vulgaris
Phvul.008G189300 0.5kb downstream 0.5kb downstream 500 false Chr08: 52749170-52749669 Phaseolus vulgaris
Phvul.008G189300 1.0kb upstream 1.0kb upstream 3539 true Chr08: 52745631-52749169 Phaseolus vulgaris
Phvul.008G189300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52745631-52746630 Phaseolus vulgaris
Phvul.008G189300 1.0kb downstream 1.0kb downstream 3539 true Chr08: 52746631-52750169 Phaseolus vulgaris
Phvul.008G189300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52749170-52750169 Phaseolus vulgaris
Phvul.008G189300 2.0kb upstream 2.0kb upstream 4539 true Chr08: 52744631-52749169 Phaseolus vulgaris
Phvul.008G189300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52744631-52746630 Phaseolus vulgaris
Phvul.008G189300 2.0kb downstream 2.0kb downstream 4539 true Chr08: 52746631-52751169 Phaseolus vulgaris
Phvul.008G189300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52749170-52751169 Phaseolus vulgaris
Phvul.008G189300 5.0kb upstream 5.0kb upstream 7539 true Chr08: 52741631-52749169 Phaseolus vulgaris
Phvul.008G189300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52741631-52746630 Phaseolus vulgaris
Phvul.008G189300 5.0kb downstream 5.0kb downstream 7539 true Chr08: 52746631-52754169 Phaseolus vulgaris
Phvul.008G189300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52749170-52754169 Phaseolus vulgaris
Phvul.008G189300 10.0kb upstream 10.0kb upstream 12539 true Chr08: 52736631-52749169 Phaseolus vulgaris
Phvul.008G189300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52736631-52746630 Phaseolus vulgaris
Phvul.008G189300 10.0kb downstream 10.0kb downstream 12539 true Chr08: 52746631-52759169 Phaseolus vulgaris
Phvul.008G189300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52749170-52759169 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302731 5265 Fabidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.8679 0.0 114.521 High High
cufflinks 13.7898 0.0 36.3862    
cufflinks 1.39666 0.0 4.62389   Low
cufflinks 59.2012 0.0 156.635 High High
cufflinks 9.42272 0.0 25.8303    
cufflinks 1.97895 0.0 6.30834   Low
cufflinks 2.8408 0.0 8.64237    
cufflinks 3.59834 0.0 10.6183    
cufflinks 6.46481 0.0 18.0211    
cufflinks 12.1294 0.0 32.4057    
cufflinks 7.59354 0.0 21.0814    

0 Strain