Gene : Phvul.008G189400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22814:SF49 - HEAVY METAL ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  1905
Name:  ? Phvul.008G189400 Secondary Identifier:  ? PAC:37158766
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G189400 0.5kb upstream 0.5kb upstream 1970 true Chr08: 52754468-52756437 Phaseolus vulgaris
Phvul.008G189400 0.5kb upstream 0.5kb upstream 500 false Chr08: 52754468-52754967 Phaseolus vulgaris
Phvul.008G189400 0.5kb downstream 0.5kb downstream 1970 true Chr08: 52754968-52756937 Phaseolus vulgaris
Phvul.008G189400 0.5kb downstream 0.5kb downstream 500 false Chr08: 52756438-52756937 Phaseolus vulgaris
Phvul.008G189400 1.0kb upstream 1.0kb upstream 2470 true Chr08: 52753968-52756437 Phaseolus vulgaris
Phvul.008G189400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52753968-52754967 Phaseolus vulgaris
Phvul.008G189400 1.0kb downstream 1.0kb downstream 2470 true Chr08: 52754968-52757437 Phaseolus vulgaris
Phvul.008G189400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52756438-52757437 Phaseolus vulgaris
Phvul.008G189400 2.0kb upstream 2.0kb upstream 3470 true Chr08: 52752968-52756437 Phaseolus vulgaris
Phvul.008G189400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52752968-52754967 Phaseolus vulgaris
Phvul.008G189400 2.0kb downstream 2.0kb downstream 3470 true Chr08: 52754968-52758437 Phaseolus vulgaris
Phvul.008G189400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52756438-52758437 Phaseolus vulgaris
Phvul.008G189400 5.0kb upstream 5.0kb upstream 6470 true Chr08: 52749968-52756437 Phaseolus vulgaris
Phvul.008G189400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52749968-52754967 Phaseolus vulgaris
Phvul.008G189400 5.0kb downstream 5.0kb downstream 6470 true Chr08: 52754968-52761437 Phaseolus vulgaris
Phvul.008G189400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52756438-52761437 Phaseolus vulgaris
Phvul.008G189400 10.0kb upstream 10.0kb upstream 11470 true Chr08: 52744968-52756437 Phaseolus vulgaris
Phvul.008G189400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52744968-52754967 Phaseolus vulgaris
Phvul.008G189400 10.0kb downstream 10.0kb downstream 11470 true Chr08: 52754968-52766437 Phaseolus vulgaris
Phvul.008G189400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52756438-52766437 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026736 5273 Angiosperm View MSA
122304528 5265 Fabidae View MSA
124064675 5270 Rosid View MSA
123736807 5271 Pentapetalae View MSA
122795320 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.641024 0.0 2.701    
cufflinks 0.117406 0.0 0.586397 Low Low
cufflinks 0.209471 0.0 0.978379 Low  
cufflinks 0.730901 0.0 3.05482    
cufflinks 1.15172 0.0 4.6554   High
cufflinks 0.318871 0.0 1.43109 Low  
cufflinks 0.412673 0.0 1.80528 Low  
cufflinks 0.658845 0.0 2.74123    
cufflinks 1.33711 0.0 5.29152   High
cufflinks 0.0686356 0.0 0.367125 Low Low
cufflinks 0.918454 0.0 3.76445    

0 Strain