Gene : Phvul.008G177300 P. vulgaris v2.1
Genomic Order:  1786 Name:  ? Phvul.008G177300
Secondary Identifier:  ? PAC:37161083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G177300 0.5kb upstream 0.5kb upstream 1990 true Chr08: 50044509-50046498 Phaseolus vulgaris
Phvul.008G177300 0.5kb upstream 0.5kb upstream 500 false Chr08: 50045999-50046498 Phaseolus vulgaris
Phvul.008G177300 0.5kb downstream 0.5kb downstream 1990 true Chr08: 50044009-50045998 Phaseolus vulgaris
Phvul.008G177300 0.5kb downstream 0.5kb downstream 500 false Chr08: 50044009-50044508 Phaseolus vulgaris
Phvul.008G177300 1.0kb upstream 1.0kb upstream 2490 true Chr08: 50044509-50046998 Phaseolus vulgaris
Phvul.008G177300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50045999-50046998 Phaseolus vulgaris
Phvul.008G177300 1.0kb downstream 1.0kb downstream 2490 true Chr08: 50043509-50045998 Phaseolus vulgaris
Phvul.008G177300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50043509-50044508 Phaseolus vulgaris
Phvul.008G177300 2.0kb upstream 2.0kb upstream 3490 true Chr08: 50044509-50047998 Phaseolus vulgaris
Phvul.008G177300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50045999-50047998 Phaseolus vulgaris
Phvul.008G177300 2.0kb downstream 2.0kb downstream 3490 true Chr08: 50042509-50045998 Phaseolus vulgaris
Phvul.008G177300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50042509-50044508 Phaseolus vulgaris
Phvul.008G177300 5.0kb upstream 5.0kb upstream 6490 true Chr08: 50044509-50050998 Phaseolus vulgaris
Phvul.008G177300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50045999-50050998 Phaseolus vulgaris
Phvul.008G177300 5.0kb downstream 5.0kb downstream 6490 true Chr08: 50039509-50045998 Phaseolus vulgaris
Phvul.008G177300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50039509-50044508 Phaseolus vulgaris
Phvul.008G177300 10.0kb upstream 10.0kb upstream 11490 true Chr08: 50044509-50055998 Phaseolus vulgaris
Phvul.008G177300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50045999-50055998 Phaseolus vulgaris
Phvul.008G177300 10.0kb downstream 10.0kb downstream 11490 true Chr08: 50034509-50045998 Phaseolus vulgaris
Phvul.008G177300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50034509-50044508 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028643 5273 Angiosperm View MSA
122314045 5265 Fabidae View MSA
124070225 5270 Rosid View MSA
123752743 5271 Pentapetalae View MSA
122796561 5272 Eudicot View MSA
121298100 5274 Embryophyte View MSA
123336097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77586 0.0 21.0911    
cufflinks 0.263464 0.0 1.10958 Low  
cufflinks 0.163869 0.0 0.733336 Low  
cufflinks 33.6792 0.0 106.962   High
cufflinks 0.270794 0.0 1.15061 Low  
cufflinks 0.181957 0.0 0.801108 Low  
cufflinks 2.10189 0.0 12.0099    
cufflinks 1.76115 0.0 9.96441    
cufflinks 3.56825 0.0 17.1084    
cufflinks 0.103634 0.0 0.504983 Low Low
cufflinks 0.30361 0.0 1.27336 Low  

0 Strain