Gene : Phvul.008G177000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF378 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1783
Name:  ? Phvul.008G177000 Secondary Identifier:  ? PAC:37158172
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G177000 0.5kb upstream 0.5kb upstream 2015 true Chr08: 49984957-49986971 Phaseolus vulgaris
Phvul.008G177000 0.5kb upstream 0.5kb upstream 500 false Chr08: 49986472-49986971 Phaseolus vulgaris
Phvul.008G177000 0.5kb downstream 0.5kb downstream 2015 true Chr08: 49984457-49986471 Phaseolus vulgaris
Phvul.008G177000 0.5kb downstream 0.5kb downstream 500 false Chr08: 49984457-49984956 Phaseolus vulgaris
Phvul.008G177000 1.0kb upstream 1.0kb upstream 2515 true Chr08: 49984957-49987471 Phaseolus vulgaris
Phvul.008G177000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49986472-49987471 Phaseolus vulgaris
Phvul.008G177000 1.0kb downstream 1.0kb downstream 2515 true Chr08: 49983957-49986471 Phaseolus vulgaris
Phvul.008G177000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49983957-49984956 Phaseolus vulgaris
Phvul.008G177000 2.0kb upstream 2.0kb upstream 3515 true Chr08: 49984957-49988471 Phaseolus vulgaris
Phvul.008G177000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49986472-49988471 Phaseolus vulgaris
Phvul.008G177000 2.0kb downstream 2.0kb downstream 3515 true Chr08: 49982957-49986471 Phaseolus vulgaris
Phvul.008G177000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49982957-49984956 Phaseolus vulgaris
Phvul.008G177000 5.0kb upstream 5.0kb upstream 6515 true Chr08: 49984957-49991471 Phaseolus vulgaris
Phvul.008G177000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49986472-49991471 Phaseolus vulgaris
Phvul.008G177000 5.0kb downstream 5.0kb downstream 6515 true Chr08: 49979957-49986471 Phaseolus vulgaris
Phvul.008G177000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49979957-49984956 Phaseolus vulgaris
Phvul.008G177000 10.0kb upstream 10.0kb upstream 11515 true Chr08: 49984957-49996471 Phaseolus vulgaris
Phvul.008G177000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49986472-49996471 Phaseolus vulgaris
Phvul.008G177000 10.0kb downstream 10.0kb downstream 11515 true Chr08: 49974957-49986471 Phaseolus vulgaris
Phvul.008G177000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49974957-49984956 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309447 5265 Fabidae View MSA
124071133 5270 Rosid View MSA
123751065 5271 Pentapetalae View MSA
122791339 5272 Eudicot View MSA
122044006 5273 Angiosperm View MSA
121310225 5274 Embryophyte View MSA
123347773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44174 0.0 10.3182    
cufflinks 7.0647 0.0 19.7666    
cufflinks 0.771734 0.0 2.761   Low
cufflinks 7.71935 0.0 21.3283    
cufflinks 2.42369 0.0 7.56805    
cufflinks 1.46937 0.0 4.89488   Low
cufflinks 8.26615 0.0 22.7336   High
cufflinks 7.98284 0.0 22.0892    
cufflinks 6.36525 0.0 17.9768    
cufflinks 1.78301 0.0 5.77605    
cufflinks 4.20344 0.0 12.3386    

0 Strain