Gene : Phvul.008G176900 P. vulgaris v2.1
Defline:  (1 of 6) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  1782
Name:  ? Phvul.008G176900 Secondary Identifier:  ? PAC:37160973
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G176900 0.5kb upstream 0.5kb upstream 1440 true Chr08: 49927876-49929315 Phaseolus vulgaris
Phvul.008G176900 0.5kb upstream 0.5kb upstream 500 false Chr08: 49928816-49929315 Phaseolus vulgaris
Phvul.008G176900 0.5kb downstream 0.5kb downstream 1440 true Chr08: 49927376-49928815 Phaseolus vulgaris
Phvul.008G176900 0.5kb downstream 0.5kb downstream 500 false Chr08: 49927376-49927875 Phaseolus vulgaris
Phvul.008G176900 1.0kb upstream 1.0kb upstream 1940 true Chr08: 49927876-49929815 Phaseolus vulgaris
Phvul.008G176900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49928816-49929815 Phaseolus vulgaris
Phvul.008G176900 1.0kb downstream 1.0kb downstream 1940 true Chr08: 49926876-49928815 Phaseolus vulgaris
Phvul.008G176900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49926876-49927875 Phaseolus vulgaris
Phvul.008G176900 2.0kb upstream 2.0kb upstream 2940 true Chr08: 49927876-49930815 Phaseolus vulgaris
Phvul.008G176900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49928816-49930815 Phaseolus vulgaris
Phvul.008G176900 2.0kb downstream 2.0kb downstream 2940 true Chr08: 49925876-49928815 Phaseolus vulgaris
Phvul.008G176900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49925876-49927875 Phaseolus vulgaris
Phvul.008G176900 5.0kb upstream 5.0kb upstream 5940 true Chr08: 49927876-49933815 Phaseolus vulgaris
Phvul.008G176900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49928816-49933815 Phaseolus vulgaris
Phvul.008G176900 5.0kb downstream 5.0kb downstream 5940 true Chr08: 49922876-49928815 Phaseolus vulgaris
Phvul.008G176900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49922876-49927875 Phaseolus vulgaris
Phvul.008G176900 10.0kb upstream 10.0kb upstream 10940 true Chr08: 49927876-49938815 Phaseolus vulgaris
Phvul.008G176900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49928816-49938815 Phaseolus vulgaris
Phvul.008G176900 10.0kb downstream 10.0kb downstream 10940 true Chr08: 49917876-49928815 Phaseolus vulgaris
Phvul.008G176900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49917876-49927875 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310394 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.562532 0.0 2.20819    
cufflinks 0.314574 0.0 1.29572 Low  
cufflinks 0.161624 0.0 0.704434 Low Low
cufflinks 0.272157 0.0 1.13749 Low  
cufflinks 0.410804 0.0 1.66053 Low  
cufflinks 0.246126 0.0 1.03453 Low  
cufflinks 1.67314 0.0 5.99876   High
cufflinks 7.2811 0.0 22.1621   High
cufflinks 0.748984 0.0 2.88039    
cufflinks 0.204001 0.0 0.87422 Low  
cufflinks 0.343859 0.0 1.40937 Low  

0 Strain