Gene : Phvul.008G175700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31279:SF3 - (PHI-1) PROTEIN, PUTATIVE-RELATED Genomic Order:  1768
Name:  ? Phvul.008G175700 Secondary Identifier:  ? PAC:37157951
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G175700 0.5kb upstream 0.5kb upstream 1706 true Chr08: 49617261-49618966 Phaseolus vulgaris
Phvul.008G175700 0.5kb upstream 0.5kb upstream 500 false Chr08: 49617261-49617760 Phaseolus vulgaris
Phvul.008G175700 0.5kb downstream 0.5kb downstream 1706 true Chr08: 49617761-49619466 Phaseolus vulgaris
Phvul.008G175700 0.5kb downstream 0.5kb downstream 500 false Chr08: 49618967-49619466 Phaseolus vulgaris
Phvul.008G175700 1.0kb upstream 1.0kb upstream 2206 true Chr08: 49616761-49618966 Phaseolus vulgaris
Phvul.008G175700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49616761-49617760 Phaseolus vulgaris
Phvul.008G175700 1.0kb downstream 1.0kb downstream 2206 true Chr08: 49617761-49619966 Phaseolus vulgaris
Phvul.008G175700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49618967-49619966 Phaseolus vulgaris
Phvul.008G175700 2.0kb upstream 2.0kb upstream 3206 true Chr08: 49615761-49618966 Phaseolus vulgaris
Phvul.008G175700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49615761-49617760 Phaseolus vulgaris
Phvul.008G175700 2.0kb downstream 2.0kb downstream 3206 true Chr08: 49617761-49620966 Phaseolus vulgaris
Phvul.008G175700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49618967-49620966 Phaseolus vulgaris
Phvul.008G175700 5.0kb upstream 5.0kb upstream 6206 true Chr08: 49612761-49618966 Phaseolus vulgaris
Phvul.008G175700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49612761-49617760 Phaseolus vulgaris
Phvul.008G175700 5.0kb downstream 5.0kb downstream 6206 true Chr08: 49617761-49623966 Phaseolus vulgaris
Phvul.008G175700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49618967-49623966 Phaseolus vulgaris
Phvul.008G175700 10.0kb upstream 10.0kb upstream 11206 true Chr08: 49607761-49618966 Phaseolus vulgaris
Phvul.008G175700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49607761-49617760 Phaseolus vulgaris
Phvul.008G175700 10.0kb downstream 10.0kb downstream 11206 true Chr08: 49617761-49628966 Phaseolus vulgaris
Phvul.008G175700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49618967-49628966 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307343 5265 Fabidae View MSA
124074854 5270 Rosid View MSA
123747459 5271 Pentapetalae View MSA
122794383 5272 Eudicot View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.05486 0.0 22.8261    
cufflinks 23.3907 0.0 61.0687    
cufflinks 1.99439 0.0 6.65784   Low
cufflinks 10.8307 0.0 29.7026    
cufflinks 11.1805 0.0 30.6386    
cufflinks 17.2549 0.0 45.8798    
cufflinks 30.4594 0.0 78.7893 High  
cufflinks 28.5679 0.0 74.0754 High  
cufflinks 10.285 0.0 28.3278    
cufflinks 39.1941 0.0 101.33 High High
cufflinks 13.4998 0.0 36.4012    

0 Strain