Gene : Phvul.008G178800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF19 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1801
Name:  ? Phvul.008G178800 Secondary Identifier:  ? PAC:37160790
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G178800 0.5kb upstream 0.5kb upstream 3192 true Chr08: 50540675-50543866 Phaseolus vulgaris
Phvul.008G178800 0.5kb upstream 0.5kb upstream 500 false Chr08: 50540675-50541174 Phaseolus vulgaris
Phvul.008G178800 0.5kb downstream 0.5kb downstream 3192 true Chr08: 50541175-50544366 Phaseolus vulgaris
Phvul.008G178800 0.5kb downstream 0.5kb downstream 500 false Chr08: 50543867-50544366 Phaseolus vulgaris
Phvul.008G178800 1.0kb upstream 1.0kb upstream 3692 true Chr08: 50540175-50543866 Phaseolus vulgaris
Phvul.008G178800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50540175-50541174 Phaseolus vulgaris
Phvul.008G178800 1.0kb downstream 1.0kb downstream 3692 true Chr08: 50541175-50544866 Phaseolus vulgaris
Phvul.008G178800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50543867-50544866 Phaseolus vulgaris
Phvul.008G178800 2.0kb upstream 2.0kb upstream 4692 true Chr08: 50539175-50543866 Phaseolus vulgaris
Phvul.008G178800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50539175-50541174 Phaseolus vulgaris
Phvul.008G178800 2.0kb downstream 2.0kb downstream 4692 true Chr08: 50541175-50545866 Phaseolus vulgaris
Phvul.008G178800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50543867-50545866 Phaseolus vulgaris
Phvul.008G178800 5.0kb upstream 5.0kb upstream 7692 true Chr08: 50536175-50543866 Phaseolus vulgaris
Phvul.008G178800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50536175-50541174 Phaseolus vulgaris
Phvul.008G178800 5.0kb downstream 5.0kb downstream 7692 true Chr08: 50541175-50548866 Phaseolus vulgaris
Phvul.008G178800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50543867-50548866 Phaseolus vulgaris
Phvul.008G178800 10.0kb upstream 10.0kb upstream 12692 true Chr08: 50531175-50543866 Phaseolus vulgaris
Phvul.008G178800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50531175-50541174 Phaseolus vulgaris
Phvul.008G178800 10.0kb downstream 10.0kb downstream 12692 true Chr08: 50541175-50553866 Phaseolus vulgaris
Phvul.008G178800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50543867-50553866 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311254 5265 Fabidae View MSA
124064450 5270 Rosid View MSA
123736447 5271 Pentapetalae View MSA
122793262 5272 Eudicot View MSA
122046471 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37023 0.0 13.5656    
cufflinks 1.71188 0.0 5.9126    
cufflinks 1.25143 0.0 4.45722    
cufflinks 3.44756 0.0 11.0775    
cufflinks 0.881308 0.0 3.26449   Low
cufflinks 0.838297 0.0 3.09498   Low
cufflinks 5.1242 0.0 15.6019   High
cufflinks 6.7465 0.0 19.7679   High
cufflinks 3.90899 0.0 12.2931    
cufflinks 2.43084 0.0 8.08661    
cufflinks 2.35251 0.0 7.88015    

0 Strain