Gene : Phvul.008G180100 P. vulgaris v2.1
Defline:  (1 of 123) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1812
Name:  ? Phvul.008G180100 Secondary Identifier:  ? PAC:37161223
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G180100 0.5kb upstream 0.5kb upstream 2934 true Chr08: 50937455-50940388 Phaseolus vulgaris
Phvul.008G180100 0.5kb upstream 0.5kb upstream 500 false Chr08: 50939889-50940388 Phaseolus vulgaris
Phvul.008G180100 0.5kb downstream 0.5kb downstream 2934 true Chr08: 50936955-50939888 Phaseolus vulgaris
Phvul.008G180100 0.5kb downstream 0.5kb downstream 500 false Chr08: 50936955-50937454 Phaseolus vulgaris
Phvul.008G180100 1.0kb upstream 1.0kb upstream 3434 true Chr08: 50937455-50940888 Phaseolus vulgaris
Phvul.008G180100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 50939889-50940888 Phaseolus vulgaris
Phvul.008G180100 1.0kb downstream 1.0kb downstream 3434 true Chr08: 50936455-50939888 Phaseolus vulgaris
Phvul.008G180100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 50936455-50937454 Phaseolus vulgaris
Phvul.008G180100 2.0kb upstream 2.0kb upstream 4434 true Chr08: 50937455-50941888 Phaseolus vulgaris
Phvul.008G180100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 50939889-50941888 Phaseolus vulgaris
Phvul.008G180100 2.0kb downstream 2.0kb downstream 4434 true Chr08: 50935455-50939888 Phaseolus vulgaris
Phvul.008G180100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 50935455-50937454 Phaseolus vulgaris
Phvul.008G180100 5.0kb upstream 5.0kb upstream 7434 true Chr08: 50937455-50944888 Phaseolus vulgaris
Phvul.008G180100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 50939889-50944888 Phaseolus vulgaris
Phvul.008G180100 5.0kb downstream 5.0kb downstream 7434 true Chr08: 50932455-50939888 Phaseolus vulgaris
Phvul.008G180100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 50932455-50937454 Phaseolus vulgaris
Phvul.008G180100 10.0kb upstream 10.0kb upstream 12434 true Chr08: 50937455-50949888 Phaseolus vulgaris
Phvul.008G180100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 50939889-50949888 Phaseolus vulgaris
Phvul.008G180100 10.0kb downstream 10.0kb downstream 12434 true Chr08: 50927455-50939888 Phaseolus vulgaris
Phvul.008G180100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 50927455-50937454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302832 5265 Fabidae View MSA
124074105 5270 Rosid View MSA
123739419 5271 Pentapetalae View MSA
122790289 5272 Eudicot View MSA
122050043 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349167 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.431 0.0 41.102   High
cufflinks 8.25831 0.0 25.1459    
cufflinks 5.01151 0.0 16.1651    
cufflinks 7.42348 0.0 22.8022    
cufflinks 4.13391 0.0 13.6264    
cufflinks 3.50744 0.0 11.7596    
cufflinks 3.60508 0.0 11.9988    
cufflinks 13.3184 0.0 38.2946   High
cufflinks 2.60918 0.0 9.00547   Low
cufflinks 11.2386 0.0 33.0327   High
cufflinks 4.5069 0.0 14.715    

0 Strain