Gene : Phvul.008G181400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11002:SF19 - CARBONIC ANHYDRASE Genomic Order:  1825
Name:  ? Phvul.008G181400 Secondary Identifier:  ? PAC:37160373
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CYANCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-241 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7115 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7117 Phaseolus vulgaris pathologic  
Pvulgaris PWYQT-4429 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G181400 0.5kb upstream 0.5kb upstream 3080 true Chr08: 51316042-51319121 Phaseolus vulgaris
Phvul.008G181400 0.5kb upstream 0.5kb upstream 500 false Chr08: 51318622-51319121 Phaseolus vulgaris
Phvul.008G181400 0.5kb downstream 0.5kb downstream 3080 true Chr08: 51315542-51318621 Phaseolus vulgaris
Phvul.008G181400 0.5kb downstream 0.5kb downstream 500 false Chr08: 51315542-51316041 Phaseolus vulgaris
Phvul.008G181400 1.0kb upstream 1.0kb upstream 3580 true Chr08: 51316042-51319621 Phaseolus vulgaris
Phvul.008G181400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51318622-51319621 Phaseolus vulgaris
Phvul.008G181400 1.0kb downstream 1.0kb downstream 3580 true Chr08: 51315042-51318621 Phaseolus vulgaris
Phvul.008G181400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51315042-51316041 Phaseolus vulgaris
Phvul.008G181400 2.0kb upstream 2.0kb upstream 4580 true Chr08: 51316042-51320621 Phaseolus vulgaris
Phvul.008G181400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51318622-51320621 Phaseolus vulgaris
Phvul.008G181400 2.0kb downstream 2.0kb downstream 4580 true Chr08: 51314042-51318621 Phaseolus vulgaris
Phvul.008G181400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51314042-51316041 Phaseolus vulgaris
Phvul.008G181400 5.0kb upstream 5.0kb upstream 7580 true Chr08: 51316042-51323621 Phaseolus vulgaris
Phvul.008G181400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51318622-51323621 Phaseolus vulgaris
Phvul.008G181400 5.0kb downstream 5.0kb downstream 7580 true Chr08: 51311042-51318621 Phaseolus vulgaris
Phvul.008G181400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51311042-51316041 Phaseolus vulgaris
Phvul.008G181400 10.0kb upstream 10.0kb upstream 12580 true Chr08: 51316042-51328621 Phaseolus vulgaris
Phvul.008G181400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51318622-51328621 Phaseolus vulgaris
Phvul.008G181400 10.0kb downstream 10.0kb downstream 12580 true Chr08: 51306042-51318621 Phaseolus vulgaris
Phvul.008G181400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51306042-51316041 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308987 5265 Fabidae View MSA
124069965 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.6878 0.0 140.446 High High
cufflinks 8.9794 0.0 37.2932    
cufflinks 10.4428 0.0 40.2357    
cufflinks 2.64469 0.0 13.2664    
cufflinks 4.91032 0.0 20.1076    
cufflinks 1.76674 0.0 11.4062    
cufflinks 0.652051 0.0 3.04941   Low
cufflinks 0.540255 0.0 3.99275   Low
cufflinks 7.85551 0.0 33.7203    
cufflinks 2.82063 0.0 16.009    
cufflinks 0.87098 0.0 4.03142   Low

0 Strain