Gene : Phvul.008G181000 P. vulgaris v2.1
Defline:  (1 of 9) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Genomic Order:  1821
Name:  ? Phvul.008G181000 Secondary Identifier:  ? PAC:37159506
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G181000 0.5kb upstream 0.5kb upstream 8493 true Chr08: 51160339-51168831 Phaseolus vulgaris
Phvul.008G181000 0.5kb upstream 0.5kb upstream 500 false Chr08: 51160339-51160838 Phaseolus vulgaris
Phvul.008G181000 0.5kb downstream 0.5kb downstream 8493 true Chr08: 51160839-51169331 Phaseolus vulgaris
Phvul.008G181000 0.5kb downstream 0.5kb downstream 500 false Chr08: 51168832-51169331 Phaseolus vulgaris
Phvul.008G181000 1.0kb upstream 1.0kb upstream 8993 true Chr08: 51159839-51168831 Phaseolus vulgaris
Phvul.008G181000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51159839-51160838 Phaseolus vulgaris
Phvul.008G181000 1.0kb downstream 1.0kb downstream 8993 true Chr08: 51160839-51169831 Phaseolus vulgaris
Phvul.008G181000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51168832-51169831 Phaseolus vulgaris
Phvul.008G181000 2.0kb upstream 2.0kb upstream 9993 true Chr08: 51158839-51168831 Phaseolus vulgaris
Phvul.008G181000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51158839-51160838 Phaseolus vulgaris
Phvul.008G181000 2.0kb downstream 2.0kb downstream 9993 true Chr08: 51160839-51170831 Phaseolus vulgaris
Phvul.008G181000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51168832-51170831 Phaseolus vulgaris
Phvul.008G181000 5.0kb upstream 5.0kb upstream 12993 true Chr08: 51155839-51168831 Phaseolus vulgaris
Phvul.008G181000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51155839-51160838 Phaseolus vulgaris
Phvul.008G181000 5.0kb downstream 5.0kb downstream 12993 true Chr08: 51160839-51173831 Phaseolus vulgaris
Phvul.008G181000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51168832-51173831 Phaseolus vulgaris
Phvul.008G181000 10.0kb upstream 10.0kb upstream 17993 true Chr08: 51150839-51168831 Phaseolus vulgaris
Phvul.008G181000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51150839-51160838 Phaseolus vulgaris
Phvul.008G181000 10.0kb downstream 10.0kb downstream 17993 true Chr08: 51160839-51178831 Phaseolus vulgaris
Phvul.008G181000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51168832-51178831 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296337 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99508 0.0 10.8944   Low
cufflinks 6.41144 0.0 16.8984    
cufflinks 5.48425 0.0 14.5842    
cufflinks 2.96237 0.0 8.34958   Low
cufflinks 7.34996 0.0 19.2693    
cufflinks 6.69955 0.0 17.6072    
cufflinks 8.48435 0.0 22.0559    
cufflinks 10.1435 0.0 26.2432    
cufflinks 7.00666 0.0 18.3956    
cufflinks 14.6152 0.0 37.8274   High
cufflinks 6.37555 0.0 16.8492    

0 Strain