Gene : Phvul.008G162500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR18860//PTHR18860:SF26 - 14-3-3 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1776
Name:  ? Phvul.008G162500 Secondary Identifier:  ? PAC:37160785
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G162500 0.5kb upstream 0.5kb upstream 3082 true Chr08: 49780649-49783730 Phaseolus vulgaris
Phvul.008G162500 0.5kb upstream 0.5kb upstream 500 false Chr08: 49780649-49781148 Phaseolus vulgaris
Phvul.008G162500 0.5kb downstream 0.5kb downstream 3082 true Chr08: 49781149-49784230 Phaseolus vulgaris
Phvul.008G162500 0.5kb downstream 0.5kb downstream 500 false Chr08: 49783731-49784230 Phaseolus vulgaris
Phvul.008G162500 1.0kb upstream 1.0kb upstream 3582 true Chr08: 49780149-49783730 Phaseolus vulgaris
Phvul.008G162500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49780149-49781148 Phaseolus vulgaris
Phvul.008G162500 1.0kb downstream 1.0kb downstream 3582 true Chr08: 49781149-49784730 Phaseolus vulgaris
Phvul.008G162500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49783731-49784730 Phaseolus vulgaris
Phvul.008G162500 2.0kb upstream 2.0kb upstream 4582 true Chr08: 49779149-49783730 Phaseolus vulgaris
Phvul.008G162500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49779149-49781148 Phaseolus vulgaris
Phvul.008G162500 2.0kb downstream 2.0kb downstream 4582 true Chr08: 49781149-49785730 Phaseolus vulgaris
Phvul.008G162500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49783731-49785730 Phaseolus vulgaris
Phvul.008G162500 5.0kb upstream 5.0kb upstream 7582 true Chr08: 49776149-49783730 Phaseolus vulgaris
Phvul.008G162500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49776149-49781148 Phaseolus vulgaris
Phvul.008G162500 5.0kb downstream 5.0kb downstream 7582 true Chr08: 49781149-49788730 Phaseolus vulgaris
Phvul.008G162500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49783731-49788730 Phaseolus vulgaris
Phvul.008G162500 10.0kb upstream 10.0kb upstream 12582 true Chr08: 49771149-49783730 Phaseolus vulgaris
Phvul.008G162500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49771149-49781148 Phaseolus vulgaris
Phvul.008G162500 10.0kb downstream 10.0kb downstream 12582 true Chr08: 49781149-49793730 Phaseolus vulgaris
Phvul.008G162500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49783731-49793730 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309555 5265 Fabidae View MSA
124070748 5270 Rosid View MSA
123751126 5271 Pentapetalae View MSA
122788245 5272 Eudicot View MSA
122041816 5273 Angiosperm View MSA
121344523 5274 Embryophyte View MSA
123424699 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 300.528 0.0 948.058 High  
cufflinks 231.1 0.0 697.677 High  
cufflinks 261.157 0.0 795.905 High  
cufflinks 454.049 0.0 1583.48 High High
cufflinks 341.388 0.0 1106.55 High  
cufflinks 227.069 0.0 683.131 High  
cufflinks 232.856 0.0 712.296 High  
cufflinks 274.148 0.0 848.452 High  
cufflinks 391.176 0.0 1317.64 High High
cufflinks 157.851 0.0 451.985 High Low
cufflinks 335.124 0.0 1084.75 High  

0 Strain