Gene : Phvul.008G166800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Genomic Order:  1661
Name:  ? Phvul.008G166800 Secondary Identifier:  ? PAC:37158358
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G166800 0.5kb upstream 0.5kb upstream 8150 true Chr08: 45580973-45589122 Phaseolus vulgaris
Phvul.008G166800 0.5kb upstream 0.5kb upstream 500 false Chr08: 45580973-45581472 Phaseolus vulgaris
Phvul.008G166800 0.5kb downstream 0.5kb downstream 8150 true Chr08: 45581473-45589622 Phaseolus vulgaris
Phvul.008G166800 0.5kb downstream 0.5kb downstream 500 false Chr08: 45589123-45589622 Phaseolus vulgaris
Phvul.008G166800 1.0kb upstream 1.0kb upstream 8650 true Chr08: 45580473-45589122 Phaseolus vulgaris
Phvul.008G166800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45580473-45581472 Phaseolus vulgaris
Phvul.008G166800 1.0kb downstream 1.0kb downstream 8650 true Chr08: 45581473-45590122 Phaseolus vulgaris
Phvul.008G166800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45589123-45590122 Phaseolus vulgaris
Phvul.008G166800 2.0kb upstream 2.0kb upstream 9650 true Chr08: 45579473-45589122 Phaseolus vulgaris
Phvul.008G166800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45579473-45581472 Phaseolus vulgaris
Phvul.008G166800 2.0kb downstream 2.0kb downstream 9650 true Chr08: 45581473-45591122 Phaseolus vulgaris
Phvul.008G166800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45589123-45591122 Phaseolus vulgaris
Phvul.008G166800 5.0kb upstream 5.0kb upstream 12650 true Chr08: 45576473-45589122 Phaseolus vulgaris
Phvul.008G166800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45576473-45581472 Phaseolus vulgaris
Phvul.008G166800 5.0kb downstream 5.0kb downstream 12650 true Chr08: 45581473-45594122 Phaseolus vulgaris
Phvul.008G166800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45589123-45594122 Phaseolus vulgaris
Phvul.008G166800 10.0kb upstream 10.0kb upstream 17650 true Chr08: 45571473-45589122 Phaseolus vulgaris
Phvul.008G166800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45571473-45581472 Phaseolus vulgaris
Phvul.008G166800 10.0kb downstream 10.0kb downstream 17650 true Chr08: 45581473-45599122 Phaseolus vulgaris
Phvul.008G166800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45589123-45599122 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122255163 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76714 0.0 15.8094   Low
cufflinks 4.74659 0.0 21.7065    
cufflinks 5.18433 0.0 18.449    
cufflinks 5.23324 0.0 20.7621    
cufflinks 3.26015 0.0 15.4005   Low
cufflinks 5.85005 0.0 22.462    
cufflinks 7.85136 0.0 25.8448    
cufflinks 6.79043 0.0 25.6049    
cufflinks 8.54752 0.0 30.8622   High
cufflinks 10.7975 0.0 38.5031   High
cufflinks 4.86985 0.0 17.5326    

0 Strain