Gene : Phvul.008G164700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1640
Name:  ? Phvul.008G164700 Secondary Identifier:  ? PAC:37158753
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G164700 0.5kb upstream 0.5kb upstream 3534 true Chr08: 45048590-45052123 Phaseolus vulgaris
Phvul.008G164700 0.5kb upstream 0.5kb upstream 500 false Chr08: 45051624-45052123 Phaseolus vulgaris
Phvul.008G164700 0.5kb downstream 0.5kb downstream 3534 true Chr08: 45048090-45051623 Phaseolus vulgaris
Phvul.008G164700 0.5kb downstream 0.5kb downstream 500 false Chr08: 45048090-45048589 Phaseolus vulgaris
Phvul.008G164700 1.0kb upstream 1.0kb upstream 4034 true Chr08: 45048590-45052623 Phaseolus vulgaris
Phvul.008G164700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45051624-45052623 Phaseolus vulgaris
Phvul.008G164700 1.0kb downstream 1.0kb downstream 4034 true Chr08: 45047590-45051623 Phaseolus vulgaris
Phvul.008G164700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45047590-45048589 Phaseolus vulgaris
Phvul.008G164700 2.0kb upstream 2.0kb upstream 5034 true Chr08: 45048590-45053623 Phaseolus vulgaris
Phvul.008G164700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45051624-45053623 Phaseolus vulgaris
Phvul.008G164700 2.0kb downstream 2.0kb downstream 5034 true Chr08: 45046590-45051623 Phaseolus vulgaris
Phvul.008G164700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45046590-45048589 Phaseolus vulgaris
Phvul.008G164700 5.0kb upstream 5.0kb upstream 8034 true Chr08: 45048590-45056623 Phaseolus vulgaris
Phvul.008G164700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45051624-45056623 Phaseolus vulgaris
Phvul.008G164700 5.0kb downstream 5.0kb downstream 8034 true Chr08: 45043590-45051623 Phaseolus vulgaris
Phvul.008G164700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45043590-45048589 Phaseolus vulgaris
Phvul.008G164700 10.0kb upstream 10.0kb upstream 13034 true Chr08: 45048590-45061623 Phaseolus vulgaris
Phvul.008G164700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45051624-45061623 Phaseolus vulgaris
Phvul.008G164700 10.0kb downstream 10.0kb downstream 13034 true Chr08: 45038590-45051623 Phaseolus vulgaris
Phvul.008G164700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45038590-45048589 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254901 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8158 0.0 43.2617    
cufflinks 7.96998 0.0 23.2883    
cufflinks 7.1256 0.0 21.0412    
cufflinks 13.8938 0.0 38.7762    
cufflinks 5.5394 0.0 16.9847   Low
cufflinks 11.8088 0.0 33.1425    
cufflinks 16.6249 0.0 45.2359    
cufflinks 20.7256 0.0 55.2797   High
cufflinks 19.8492 0.0 53.2702   High
cufflinks 5.47036 0.0 16.7462   Low
cufflinks 10.3735 0.0 29.6149    

0 Strain