Gene : Phvul.008G165400 P. vulgaris v2.1
Genomic Order:  1647 Name:  ? Phvul.008G165400
Secondary Identifier:  ? PAC:37159626
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G165400 0.5kb upstream 0.5kb upstream 4649 true Chr08: 45204087-45208735 Phaseolus vulgaris
Phvul.008G165400 0.5kb upstream 0.5kb upstream 500 false Chr08: 45208236-45208735 Phaseolus vulgaris
Phvul.008G165400 0.5kb downstream 0.5kb downstream 4649 true Chr08: 45203587-45208235 Phaseolus vulgaris
Phvul.008G165400 0.5kb downstream 0.5kb downstream 500 false Chr08: 45203587-45204086 Phaseolus vulgaris
Phvul.008G165400 1.0kb upstream 1.0kb upstream 5149 true Chr08: 45204087-45209235 Phaseolus vulgaris
Phvul.008G165400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45208236-45209235 Phaseolus vulgaris
Phvul.008G165400 1.0kb downstream 1.0kb downstream 5149 true Chr08: 45203087-45208235 Phaseolus vulgaris
Phvul.008G165400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45203087-45204086 Phaseolus vulgaris
Phvul.008G165400 2.0kb upstream 2.0kb upstream 6149 true Chr08: 45204087-45210235 Phaseolus vulgaris
Phvul.008G165400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45208236-45210235 Phaseolus vulgaris
Phvul.008G165400 2.0kb downstream 2.0kb downstream 6149 true Chr08: 45202087-45208235 Phaseolus vulgaris
Phvul.008G165400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45202087-45204086 Phaseolus vulgaris
Phvul.008G165400 5.0kb upstream 5.0kb upstream 9149 true Chr08: 45204087-45213235 Phaseolus vulgaris
Phvul.008G165400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45208236-45213235 Phaseolus vulgaris
Phvul.008G165400 5.0kb downstream 5.0kb downstream 9149 true Chr08: 45199087-45208235 Phaseolus vulgaris
Phvul.008G165400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45199087-45204086 Phaseolus vulgaris
Phvul.008G165400 10.0kb upstream 10.0kb upstream 14149 true Chr08: 45204087-45218235 Phaseolus vulgaris
Phvul.008G165400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45208236-45218235 Phaseolus vulgaris
Phvul.008G165400 10.0kb downstream 10.0kb downstream 14149 true Chr08: 45194087-45208235 Phaseolus vulgaris
Phvul.008G165400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45194087-45204086 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302211 5265 Fabidae View MSA
124066904 5270 Rosid View MSA
123739250 5271 Pentapetalae View MSA
122788095 5272 Eudicot View MSA
122042789 5273 Angiosperm View MSA
121345472 5274 Embryophyte View MSA
123380224 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0425 0.0 69.382    
cufflinks 13.5769 0.0 74.29    
cufflinks 16.0256 0.0 75.3336    
cufflinks 19.6187 0.0 95.0624   High
cufflinks 13.7422 0.0 67.149    
cufflinks 11.24 0.0 50.8814    
cufflinks 9.30647 0.0 52.0032    
cufflinks 10.9806 0.0 61.346    
cufflinks 8.69267 0.0 39.976   Low
cufflinks 7.30569 0.0 43.3103   Low
cufflinks 14.85 0.0 71.8709    

0 Strain