Gene : Phvul.008G168300 P. vulgaris v2.1
Genomic Order:  1693 Name:  ? Phvul.008G168300
Secondary Identifier:  ? PAC:37160499
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G168300 0.5kb upstream 0.5kb upstream 7489 true Chr08: 46958280-46965768 Phaseolus vulgaris
Phvul.008G168300 0.5kb upstream 0.5kb upstream 500 false Chr08: 46958280-46958779 Phaseolus vulgaris
Phvul.008G168300 0.5kb downstream 0.5kb downstream 7489 true Chr08: 46958780-46966268 Phaseolus vulgaris
Phvul.008G168300 0.5kb downstream 0.5kb downstream 500 false Chr08: 46965769-46966268 Phaseolus vulgaris
Phvul.008G168300 1.0kb upstream 1.0kb upstream 7989 true Chr08: 46957780-46965768 Phaseolus vulgaris
Phvul.008G168300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46957780-46958779 Phaseolus vulgaris
Phvul.008G168300 1.0kb downstream 1.0kb downstream 7989 true Chr08: 46958780-46966768 Phaseolus vulgaris
Phvul.008G168300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46965769-46966768 Phaseolus vulgaris
Phvul.008G168300 2.0kb upstream 2.0kb upstream 8989 true Chr08: 46956780-46965768 Phaseolus vulgaris
Phvul.008G168300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46956780-46958779 Phaseolus vulgaris
Phvul.008G168300 2.0kb downstream 2.0kb downstream 8989 true Chr08: 46958780-46967768 Phaseolus vulgaris
Phvul.008G168300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46965769-46967768 Phaseolus vulgaris
Phvul.008G168300 5.0kb upstream 5.0kb upstream 11989 true Chr08: 46953780-46965768 Phaseolus vulgaris
Phvul.008G168300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46953780-46958779 Phaseolus vulgaris
Phvul.008G168300 5.0kb downstream 5.0kb downstream 11989 true Chr08: 46958780-46970768 Phaseolus vulgaris
Phvul.008G168300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46965769-46970768 Phaseolus vulgaris
Phvul.008G168300 10.0kb upstream 10.0kb upstream 16989 true Chr08: 46948780-46965768 Phaseolus vulgaris
Phvul.008G168300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46948780-46958779 Phaseolus vulgaris
Phvul.008G168300 10.0kb downstream 10.0kb downstream 16989 true Chr08: 46958780-46975768 Phaseolus vulgaris
Phvul.008G168300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46965769-46975768 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303831 5265 Fabidae View MSA
124066409 5270 Rosid View MSA
123746861 5271 Pentapetalae View MSA
122787160 5272 Eudicot View MSA
122049773 5273 Angiosperm View MSA
121345275 5274 Embryophyte View MSA
123425777 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.72293 0.0 12.309   Low
cufflinks 5.59126 0.0 17.6627    
cufflinks 6.1658 0.0 21.5332    
cufflinks 3.71544 0.0 12.4721   Low
cufflinks 5.78516 0.0 20.4168    
cufflinks 6.40133 0.0 19.8955    
cufflinks 5.13014 0.0 16.021    
cufflinks 6.26073 0.0 21.4321    
cufflinks 6.0434 0.0 21.0518    
cufflinks 8.28458 0.0 27.3713   High
cufflinks 5.22047 0.0 16.3441    

0 Strain