Gene : Phvul.008G168500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11214:SF74 - BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  1695
Name:  ? Phvul.008G168500 Secondary Identifier:  ? PAC:37158318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G168500 0.5kb upstream 0.5kb upstream 4328 true Chr08: 47018270-47022597 Phaseolus vulgaris
Phvul.008G168500 0.5kb upstream 0.5kb upstream 500 false Chr08: 47022098-47022597 Phaseolus vulgaris
Phvul.008G168500 0.5kb downstream 0.5kb downstream 4328 true Chr08: 47017770-47022097 Phaseolus vulgaris
Phvul.008G168500 0.5kb downstream 0.5kb downstream 500 false Chr08: 47017770-47018269 Phaseolus vulgaris
Phvul.008G168500 1.0kb upstream 1.0kb upstream 4828 true Chr08: 47018270-47023097 Phaseolus vulgaris
Phvul.008G168500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47022098-47023097 Phaseolus vulgaris
Phvul.008G168500 1.0kb downstream 1.0kb downstream 4828 true Chr08: 47017270-47022097 Phaseolus vulgaris
Phvul.008G168500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47017270-47018269 Phaseolus vulgaris
Phvul.008G168500 2.0kb upstream 2.0kb upstream 5828 true Chr08: 47018270-47024097 Phaseolus vulgaris
Phvul.008G168500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47022098-47024097 Phaseolus vulgaris
Phvul.008G168500 2.0kb downstream 2.0kb downstream 5828 true Chr08: 47016270-47022097 Phaseolus vulgaris
Phvul.008G168500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47016270-47018269 Phaseolus vulgaris
Phvul.008G168500 5.0kb upstream 5.0kb upstream 8828 true Chr08: 47018270-47027097 Phaseolus vulgaris
Phvul.008G168500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47022098-47027097 Phaseolus vulgaris
Phvul.008G168500 5.0kb downstream 5.0kb downstream 8828 true Chr08: 47013270-47022097 Phaseolus vulgaris
Phvul.008G168500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47013270-47018269 Phaseolus vulgaris
Phvul.008G168500 10.0kb upstream 10.0kb upstream 13828 true Chr08: 47018270-47032097 Phaseolus vulgaris
Phvul.008G168500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47022098-47032097 Phaseolus vulgaris
Phvul.008G168500 10.0kb downstream 10.0kb downstream 13828 true Chr08: 47008270-47022097 Phaseolus vulgaris
Phvul.008G168500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47008270-47018269 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309687 5265 Fabidae View MSA
124069367 5270 Rosid View MSA
123739102 5271 Pentapetalae View MSA
122792483 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.96775 0.0 37.0795   High
cufflinks 6.22592 0.0 24.9855   High
cufflinks 0.599578 0.0 4.68864   Low
cufflinks 5.91235 0.0 24.468   High
cufflinks 1.61945 0.0 6.25948    
cufflinks 1.67097 0.0 9.90995    
cufflinks 0.910071 0.0 5.14825    
cufflinks 0.784475 0.0 4.47179    
cufflinks 0.497892 0.0 3.40825 Low Low
cufflinks 2.73747 0.0 13.7129    
cufflinks 1.99748 0.0 10.9171    

0 Strain