Gene : Phvul.008G168700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Genomic Order:  1697
Name:  ? Phvul.008G168700 Secondary Identifier:  ? PAC:37158574
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G168700 0.5kb upstream 0.5kb upstream 4682 true Chr08: 47105633-47110314 Phaseolus vulgaris
Phvul.008G168700 0.5kb upstream 0.5kb upstream 500 false Chr08: 47105633-47106132 Phaseolus vulgaris
Phvul.008G168700 0.5kb downstream 0.5kb downstream 4682 true Chr08: 47106133-47110814 Phaseolus vulgaris
Phvul.008G168700 0.5kb downstream 0.5kb downstream 500 false Chr08: 47110315-47110814 Phaseolus vulgaris
Phvul.008G168700 1.0kb upstream 1.0kb upstream 5182 true Chr08: 47105133-47110314 Phaseolus vulgaris
Phvul.008G168700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47105133-47106132 Phaseolus vulgaris
Phvul.008G168700 1.0kb downstream 1.0kb downstream 5182 true Chr08: 47106133-47111314 Phaseolus vulgaris
Phvul.008G168700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47110315-47111314 Phaseolus vulgaris
Phvul.008G168700 2.0kb upstream 2.0kb upstream 6182 true Chr08: 47104133-47110314 Phaseolus vulgaris
Phvul.008G168700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47104133-47106132 Phaseolus vulgaris
Phvul.008G168700 2.0kb downstream 2.0kb downstream 6182 true Chr08: 47106133-47112314 Phaseolus vulgaris
Phvul.008G168700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47110315-47112314 Phaseolus vulgaris
Phvul.008G168700 5.0kb upstream 5.0kb upstream 9182 true Chr08: 47101133-47110314 Phaseolus vulgaris
Phvul.008G168700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47101133-47106132 Phaseolus vulgaris
Phvul.008G168700 5.0kb downstream 5.0kb downstream 9182 true Chr08: 47106133-47115314 Phaseolus vulgaris
Phvul.008G168700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47110315-47115314 Phaseolus vulgaris
Phvul.008G168700 10.0kb upstream 10.0kb upstream 14182 true Chr08: 47096133-47110314 Phaseolus vulgaris
Phvul.008G168700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47096133-47106132 Phaseolus vulgaris
Phvul.008G168700 10.0kb downstream 10.0kb downstream 14182 true Chr08: 47106133-47120314 Phaseolus vulgaris
Phvul.008G168700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47110315-47120314 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309839 5265 Fabidae View MSA
124065816 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53172 0.0 4.81558   Low
cufflinks 2.47436 0.0 7.36923    
cufflinks 3.12352 0.0 9.09975    
cufflinks 2.07864 0.0 6.2723    
cufflinks 7.5569 0.0 20.146   High
cufflinks 2.58051 0.0 7.65351    
cufflinks 2.90308 0.0 8.40866    
cufflinks 3.18463 0.0 9.2112    
cufflinks 2.20985 0.0 6.62101    
cufflinks 8.36986 0.0 22.2149   High
cufflinks 8.59733 0.0 22.7085   High

0 Strain