Gene : Phvul.008G171600 P. vulgaris v2.1
Defline:  (1 of 3) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  1726
Name:  ? Phvul.008G171600 Secondary Identifier:  ? PAC:37160409
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G171600 0.5kb upstream 0.5kb upstream 7718 true Chr08: 48090804-48098521 Phaseolus vulgaris
Phvul.008G171600 0.5kb upstream 0.5kb upstream 500 false Chr08: 48090804-48091303 Phaseolus vulgaris
Phvul.008G171600 0.5kb downstream 0.5kb downstream 7718 true Chr08: 48091304-48099021 Phaseolus vulgaris
Phvul.008G171600 0.5kb downstream 0.5kb downstream 500 false Chr08: 48098522-48099021 Phaseolus vulgaris
Phvul.008G171600 1.0kb upstream 1.0kb upstream 8218 true Chr08: 48090304-48098521 Phaseolus vulgaris
Phvul.008G171600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 48090304-48091303 Phaseolus vulgaris
Phvul.008G171600 1.0kb downstream 1.0kb downstream 8218 true Chr08: 48091304-48099521 Phaseolus vulgaris
Phvul.008G171600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 48098522-48099521 Phaseolus vulgaris
Phvul.008G171600 2.0kb upstream 2.0kb upstream 9218 true Chr08: 48089304-48098521 Phaseolus vulgaris
Phvul.008G171600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 48089304-48091303 Phaseolus vulgaris
Phvul.008G171600 2.0kb downstream 2.0kb downstream 9218 true Chr08: 48091304-48100521 Phaseolus vulgaris
Phvul.008G171600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 48098522-48100521 Phaseolus vulgaris
Phvul.008G171600 5.0kb upstream 5.0kb upstream 12218 true Chr08: 48086304-48098521 Phaseolus vulgaris
Phvul.008G171600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 48086304-48091303 Phaseolus vulgaris
Phvul.008G171600 5.0kb downstream 5.0kb downstream 12218 true Chr08: 48091304-48103521 Phaseolus vulgaris
Phvul.008G171600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 48098522-48103521 Phaseolus vulgaris
Phvul.008G171600 10.0kb upstream 10.0kb upstream 17218 true Chr08: 48081304-48098521 Phaseolus vulgaris
Phvul.008G171600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 48081304-48091303 Phaseolus vulgaris
Phvul.008G171600 10.0kb downstream 10.0kb downstream 17218 true Chr08: 48091304-48108521 Phaseolus vulgaris
Phvul.008G171600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 48098522-48108521 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254941 5265 Fabidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06195 0.0 8.84334    
cufflinks 1.86701 0.0 8.75244    
cufflinks 2.2718 0.0 9.84068    
cufflinks 5.98971 0.0 21.1542   High
cufflinks 1.95698 0.0 12.3799    
cufflinks 8.46714 0.0 38.3424   High
cufflinks 0.188602 0.0 0.76827 Low  
cufflinks 0.137818 0.0 1.26609 Low Low
cufflinks 0.188999 0.0 1.52066 Low  
cufflinks 0.0272492 0.0 0.161513 Low Low
cufflinks 4.36037 0.0 23.4368    

0 Strain