Gene : Phvul.008G170800 P. vulgaris v2.1
Defline:  (1 of 3) K17470 - sulfate transporter 1, high-affinity (SULTR1) Genomic Order:  1718
Name:  ? Phvul.008G170800 Secondary Identifier:  ? PAC:37157822
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G170800 0.5kb upstream 0.5kb upstream 8008 true Chr08: 47831281-47839288 Phaseolus vulgaris
Phvul.008G170800 0.5kb upstream 0.5kb upstream 500 false Chr08: 47831281-47831780 Phaseolus vulgaris
Phvul.008G170800 0.5kb downstream 0.5kb downstream 8008 true Chr08: 47831781-47839788 Phaseolus vulgaris
Phvul.008G170800 0.5kb downstream 0.5kb downstream 500 false Chr08: 47839289-47839788 Phaseolus vulgaris
Phvul.008G170800 1.0kb upstream 1.0kb upstream 8508 true Chr08: 47830781-47839288 Phaseolus vulgaris
Phvul.008G170800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47830781-47831780 Phaseolus vulgaris
Phvul.008G170800 1.0kb downstream 1.0kb downstream 8508 true Chr08: 47831781-47840288 Phaseolus vulgaris
Phvul.008G170800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47839289-47840288 Phaseolus vulgaris
Phvul.008G170800 2.0kb upstream 2.0kb upstream 9508 true Chr08: 47829781-47839288 Phaseolus vulgaris
Phvul.008G170800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47829781-47831780 Phaseolus vulgaris
Phvul.008G170800 2.0kb downstream 2.0kb downstream 9508 true Chr08: 47831781-47841288 Phaseolus vulgaris
Phvul.008G170800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47839289-47841288 Phaseolus vulgaris
Phvul.008G170800 5.0kb upstream 5.0kb upstream 12508 true Chr08: 47826781-47839288 Phaseolus vulgaris
Phvul.008G170800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47826781-47831780 Phaseolus vulgaris
Phvul.008G170800 5.0kb downstream 5.0kb downstream 12508 true Chr08: 47831781-47844288 Phaseolus vulgaris
Phvul.008G170800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47839289-47844288 Phaseolus vulgaris
Phvul.008G170800 10.0kb upstream 10.0kb upstream 17508 true Chr08: 47821781-47839288 Phaseolus vulgaris
Phvul.008G170800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47821781-47831780 Phaseolus vulgaris
Phvul.008G170800 10.0kb downstream 10.0kb downstream 17508 true Chr08: 47831781-47849288 Phaseolus vulgaris
Phvul.008G170800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47839289-47849288 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300755 5265 Fabidae View MSA
124074885 5270 Rosid View MSA
123750861 5271 Pentapetalae View MSA
122786947 5272 Eudicot View MSA
122046224 5273 Angiosperm View MSA
123429043 5275 Viridiplantae View MSA
121349879 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49419 0.0 7.349    
cufflinks 2.37756 0.0 7.06497    
cufflinks 0.354661 0.0 1.29373 Low Low
cufflinks 0.551888 0.0 1.94663 Low  
cufflinks 3.12491 0.0 9.06115    
cufflinks 0.429326 0.0 1.54305 Low Low
cufflinks 1.85283 0.0 5.68029    
cufflinks 0.934391 0.0 3.07524    
cufflinks 0.811595 0.0 2.74227    
cufflinks 7.17303 0.0 19.1894   High
cufflinks 6.58204 0.0 17.8096   High

0 Strain