Gene : Phvul.008G156300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  1392
Name:  ? Phvul.008G156300 Secondary Identifier:  ? PAC:37158055
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G156300 0.5kb upstream 0.5kb upstream 2872 true Chr08: 26937867-26940738 Phaseolus vulgaris
Phvul.008G156300 0.5kb upstream 0.5kb upstream 500 false Chr08: 26940239-26940738 Phaseolus vulgaris
Phvul.008G156300 0.5kb downstream 0.5kb downstream 2872 true Chr08: 26937367-26940238 Phaseolus vulgaris
Phvul.008G156300 0.5kb downstream 0.5kb downstream 500 false Chr08: 26937367-26937866 Phaseolus vulgaris
Phvul.008G156300 1.0kb upstream 1.0kb upstream 3372 true Chr08: 26937867-26941238 Phaseolus vulgaris
Phvul.008G156300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 26940239-26941238 Phaseolus vulgaris
Phvul.008G156300 1.0kb downstream 1.0kb downstream 3372 true Chr08: 26936867-26940238 Phaseolus vulgaris
Phvul.008G156300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 26936867-26937866 Phaseolus vulgaris
Phvul.008G156300 2.0kb upstream 2.0kb upstream 4372 true Chr08: 26937867-26942238 Phaseolus vulgaris
Phvul.008G156300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 26940239-26942238 Phaseolus vulgaris
Phvul.008G156300 2.0kb downstream 2.0kb downstream 4372 true Chr08: 26935867-26940238 Phaseolus vulgaris
Phvul.008G156300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 26935867-26937866 Phaseolus vulgaris
Phvul.008G156300 5.0kb upstream 5.0kb upstream 7372 true Chr08: 26937867-26945238 Phaseolus vulgaris
Phvul.008G156300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 26940239-26945238 Phaseolus vulgaris
Phvul.008G156300 5.0kb downstream 5.0kb downstream 7372 true Chr08: 26932867-26940238 Phaseolus vulgaris
Phvul.008G156300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 26932867-26937866 Phaseolus vulgaris
Phvul.008G156300 10.0kb upstream 10.0kb upstream 12372 true Chr08: 26937867-26950238 Phaseolus vulgaris
Phvul.008G156300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 26940239-26950238 Phaseolus vulgaris
Phvul.008G156300 10.0kb downstream 10.0kb downstream 12372 true Chr08: 26927867-26940238 Phaseolus vulgaris
Phvul.008G156300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 26927867-26937866 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307622 5265 Fabidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 307.404 0.0 879.002 High High
cufflinks 277.08 0.0 783.361 High High
cufflinks 64.1267 0.0 165.77 High Low
cufflinks 351.586 0.0 1020.59 High High
cufflinks 116.077 0.0 303.527 High  
cufflinks 71.8979 0.0 185.876 High  
cufflinks 65.9869 0.0 170.564 High  
cufflinks 66.5353 0.0 171.985 High  
cufflinks 75.9242 0.0 196.403 High  
cufflinks 177.604 0.0 478.912 High  
cufflinks 141.902 0.0 376.123 High  

0 Strain