Gene : Phvul.008G158124 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A Genomic Order:  1548
Name:  ? Phvul.008G158124 Secondary Identifier:  ? PAC:37160615
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G158124 0.5kb upstream 0.5kb upstream 3909 true Chr08: 39331598-39335506 Phaseolus vulgaris
Phvul.008G158124 0.5kb upstream 0.5kb upstream 500 false Chr08: 39331598-39332097 Phaseolus vulgaris
Phvul.008G158124 0.5kb downstream 0.5kb downstream 3909 true Chr08: 39332098-39336006 Phaseolus vulgaris
Phvul.008G158124 0.5kb downstream 0.5kb downstream 500 false Chr08: 39335507-39336006 Phaseolus vulgaris
Phvul.008G158124 1.0kb upstream 1.0kb upstream 4409 true Chr08: 39331098-39335506 Phaseolus vulgaris
Phvul.008G158124 1.0kb upstream 1.0kb upstream 1000 false Chr08: 39331098-39332097 Phaseolus vulgaris
Phvul.008G158124 1.0kb downstream 1.0kb downstream 4409 true Chr08: 39332098-39336506 Phaseolus vulgaris
Phvul.008G158124 1.0kb downstream 1.0kb downstream 1000 false Chr08: 39335507-39336506 Phaseolus vulgaris
Phvul.008G158124 2.0kb upstream 2.0kb upstream 5409 true Chr08: 39330098-39335506 Phaseolus vulgaris
Phvul.008G158124 2.0kb upstream 2.0kb upstream 2000 false Chr08: 39330098-39332097 Phaseolus vulgaris
Phvul.008G158124 2.0kb downstream 2.0kb downstream 5409 true Chr08: 39332098-39337506 Phaseolus vulgaris
Phvul.008G158124 2.0kb downstream 2.0kb downstream 2000 false Chr08: 39335507-39337506 Phaseolus vulgaris
Phvul.008G158124 5.0kb upstream 5.0kb upstream 8409 true Chr08: 39327098-39335506 Phaseolus vulgaris
Phvul.008G158124 5.0kb upstream 5.0kb upstream 5000 false Chr08: 39327098-39332097 Phaseolus vulgaris
Phvul.008G158124 5.0kb downstream 5.0kb downstream 8409 true Chr08: 39332098-39340506 Phaseolus vulgaris
Phvul.008G158124 5.0kb downstream 5.0kb downstream 5000 false Chr08: 39335507-39340506 Phaseolus vulgaris
Phvul.008G158124 10.0kb upstream 10.0kb upstream 13409 true Chr08: 39322098-39335506 Phaseolus vulgaris
Phvul.008G158124 10.0kb upstream 10.0kb upstream 10000 false Chr08: 39322098-39332097 Phaseolus vulgaris
Phvul.008G158124 10.0kb downstream 10.0kb downstream 13409 true Chr08: 39332098-39345506 Phaseolus vulgaris
Phvul.008G158124 10.0kb downstream 10.0kb downstream 10000 false Chr08: 39335507-39345506 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300734 5265 Fabidae View MSA
124062426 5270 Rosid View MSA
123739967 5271 Pentapetalae View MSA
122796088 5272 Eudicot View MSA
122043625 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349165 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.6265 0.0 276.507 High  
cufflinks 106.839 0.0 395.424 High  
cufflinks 54.1164 0.0 192.876 High Low
cufflinks 101.661 0.0 421.285 High  
cufflinks 104.001 0.0 378.348 High  
cufflinks 66.2078 0.0 249.128 High  
cufflinks 66.9812 0.0 256.171 High  
cufflinks 69.3603 0.0 268.827 High  
cufflinks 90.4908 0.0 317.983 High  
cufflinks 110.304 0.0 415.11 High High
cufflinks 100.782 0.0 365.693 High  

0 Strain