Gene : Phvul.008G158000 P. vulgaris v2.1
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  1404
Name:  ? Phvul.008G158000 Secondary Identifier:  ? PAC:37157998
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G158000 0.5kb upstream 0.5kb upstream 3856 true Chr08: 28028157-28032012 Phaseolus vulgaris
Phvul.008G158000 0.5kb upstream 0.5kb upstream 500 false Chr08: 28028157-28028656 Phaseolus vulgaris
Phvul.008G158000 0.5kb downstream 0.5kb downstream 3856 true Chr08: 28028657-28032512 Phaseolus vulgaris
Phvul.008G158000 0.5kb downstream 0.5kb downstream 500 false Chr08: 28032013-28032512 Phaseolus vulgaris
Phvul.008G158000 1.0kb upstream 1.0kb upstream 4356 true Chr08: 28027657-28032012 Phaseolus vulgaris
Phvul.008G158000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 28027657-28028656 Phaseolus vulgaris
Phvul.008G158000 1.0kb downstream 1.0kb downstream 4356 true Chr08: 28028657-28033012 Phaseolus vulgaris
Phvul.008G158000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 28032013-28033012 Phaseolus vulgaris
Phvul.008G158000 2.0kb upstream 2.0kb upstream 5356 true Chr08: 28026657-28032012 Phaseolus vulgaris
Phvul.008G158000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 28026657-28028656 Phaseolus vulgaris
Phvul.008G158000 2.0kb downstream 2.0kb downstream 5356 true Chr08: 28028657-28034012 Phaseolus vulgaris
Phvul.008G158000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 28032013-28034012 Phaseolus vulgaris
Phvul.008G158000 5.0kb upstream 5.0kb upstream 8356 true Chr08: 28023657-28032012 Phaseolus vulgaris
Phvul.008G158000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 28023657-28028656 Phaseolus vulgaris
Phvul.008G158000 5.0kb downstream 5.0kb downstream 8356 true Chr08: 28028657-28037012 Phaseolus vulgaris
Phvul.008G158000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 28032013-28037012 Phaseolus vulgaris
Phvul.008G158000 10.0kb upstream 10.0kb upstream 13356 true Chr08: 28018657-28032012 Phaseolus vulgaris
Phvul.008G158000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 28018657-28028656 Phaseolus vulgaris
Phvul.008G158000 10.0kb downstream 10.0kb downstream 13356 true Chr08: 28028657-28042012 Phaseolus vulgaris
Phvul.008G158000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 28032013-28042012 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303246 5265 Fabidae View MSA
124073555 5270 Rosid View MSA
123741575 5271 Pentapetalae View MSA
122793789 5272 Eudicot View MSA
122045087 5273 Angiosperm View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.320748 0.0 1.24408 Low Low
cufflinks 0.320665 0.0 1.2438 Low Low
cufflinks 6.9341 0.0 19.61   High
cufflinks 0.668886 0.0 2.44162    
cufflinks 2.17112 0.0 7.01466    
cufflinks 1.85797 0.0 6.09363    
cufflinks 0.909186 0.0 3.22275    
cufflinks 0.149631 0.0 0.61567 Low Low
cufflinks 1.21289 0.0 4.17565    
cufflinks 2.54246 0.0 8.06042    
cufflinks 2.672 0.0 8.44134    

0 Strain