Gene : Phvul.008G161900 P. vulgaris v2.1
Defline:  (1 of 2) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Genomic Order:  1616
Name:  ? Phvul.008G161900 Secondary Identifier:  ? PAC:37160609
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G161900 0.5kb upstream 0.5kb upstream 3426 true Chr08: 44044020-44047445 Phaseolus vulgaris
Phvul.008G161900 0.5kb upstream 0.5kb upstream 500 false Chr08: 44044020-44044519 Phaseolus vulgaris
Phvul.008G161900 0.5kb downstream 0.5kb downstream 3426 true Chr08: 44044520-44047945 Phaseolus vulgaris
Phvul.008G161900 0.5kb downstream 0.5kb downstream 500 false Chr08: 44047446-44047945 Phaseolus vulgaris
Phvul.008G161900 1.0kb upstream 1.0kb upstream 3926 true Chr08: 44043520-44047445 Phaseolus vulgaris
Phvul.008G161900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44043520-44044519 Phaseolus vulgaris
Phvul.008G161900 1.0kb downstream 1.0kb downstream 3926 true Chr08: 44044520-44048445 Phaseolus vulgaris
Phvul.008G161900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44047446-44048445 Phaseolus vulgaris
Phvul.008G161900 2.0kb upstream 2.0kb upstream 4926 true Chr08: 44042520-44047445 Phaseolus vulgaris
Phvul.008G161900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44042520-44044519 Phaseolus vulgaris
Phvul.008G161900 2.0kb downstream 2.0kb downstream 4926 true Chr08: 44044520-44049445 Phaseolus vulgaris
Phvul.008G161900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44047446-44049445 Phaseolus vulgaris
Phvul.008G161900 5.0kb upstream 5.0kb upstream 7926 true Chr08: 44039520-44047445 Phaseolus vulgaris
Phvul.008G161900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44039520-44044519 Phaseolus vulgaris
Phvul.008G161900 5.0kb downstream 5.0kb downstream 7926 true Chr08: 44044520-44052445 Phaseolus vulgaris
Phvul.008G161900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44047446-44052445 Phaseolus vulgaris
Phvul.008G161900 10.0kb upstream 10.0kb upstream 12926 true Chr08: 44034520-44047445 Phaseolus vulgaris
Phvul.008G161900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44034520-44044519 Phaseolus vulgaris
Phvul.008G161900 10.0kb downstream 10.0kb downstream 12926 true Chr08: 44044520-44057445 Phaseolus vulgaris
Phvul.008G161900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44047446-44057445 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306560 5265 Fabidae View MSA
124062488 5270 Rosid View MSA
123750657 5271 Pentapetalae View MSA
122790384 5272 Eudicot View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.418 0.0 44.1581   High
cufflinks 10.8299 0.0 30.2794    
cufflinks 11.4114 0.0 31.7182    
cufflinks 14.1949 0.0 39.0325   High
cufflinks 12.465 0.0 34.6763    
cufflinks 6.08964 0.0 18.0612   Low
cufflinks 10.3947 0.0 29.0867    
cufflinks 8.6165 0.0 24.4345    
cufflinks 9.48676 0.0 26.8629    
cufflinks 8.78676 0.0 25.114    
cufflinks 13.2675 0.0 36.5288    

0 Strain