Gene : Phvul.008G160150 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32411:SF43 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 55 Genomic Order:  1595
Name:  ? Phvul.008G160150 Secondary Identifier:  ? PAC:37159252
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G160150 0.5kb upstream 0.5kb upstream 1253 true Chr08: 43441351-43442603 Phaseolus vulgaris
Phvul.008G160150 0.5kb upstream 0.5kb upstream 500 false Chr08: 43441351-43441850 Phaseolus vulgaris
Phvul.008G160150 0.5kb downstream 0.5kb downstream 1253 true Chr08: 43441851-43443103 Phaseolus vulgaris
Phvul.008G160150 0.5kb downstream 0.5kb downstream 500 false Chr08: 43442604-43443103 Phaseolus vulgaris
Phvul.008G160150 1.0kb upstream 1.0kb upstream 1753 true Chr08: 43440851-43442603 Phaseolus vulgaris
Phvul.008G160150 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43440851-43441850 Phaseolus vulgaris
Phvul.008G160150 1.0kb downstream 1.0kb downstream 1753 true Chr08: 43441851-43443603 Phaseolus vulgaris
Phvul.008G160150 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43442604-43443603 Phaseolus vulgaris
Phvul.008G160150 2.0kb upstream 2.0kb upstream 2753 true Chr08: 43439851-43442603 Phaseolus vulgaris
Phvul.008G160150 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43439851-43441850 Phaseolus vulgaris
Phvul.008G160150 2.0kb downstream 2.0kb downstream 2753 true Chr08: 43441851-43444603 Phaseolus vulgaris
Phvul.008G160150 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43442604-43444603 Phaseolus vulgaris
Phvul.008G160150 5.0kb upstream 5.0kb upstream 5753 true Chr08: 43436851-43442603 Phaseolus vulgaris
Phvul.008G160150 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43436851-43441850 Phaseolus vulgaris
Phvul.008G160150 5.0kb downstream 5.0kb downstream 5753 true Chr08: 43441851-43447603 Phaseolus vulgaris
Phvul.008G160150 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43442604-43447603 Phaseolus vulgaris
Phvul.008G160150 10.0kb upstream 10.0kb upstream 10753 true Chr08: 43431851-43442603 Phaseolus vulgaris
Phvul.008G160150 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43431851-43441850 Phaseolus vulgaris
Phvul.008G160150 10.0kb downstream 10.0kb downstream 10753 true Chr08: 43441851-43452603 Phaseolus vulgaris
Phvul.008G160150 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43442604-43452603 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314892 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297819 0.0 1.24366 Low  
cufflinks 0.280821 0.0 1.17966 Low  
cufflinks 0.800377 0.0 3.08245    
cufflinks 0.298764 0.0 1.25263 Low  
cufflinks 3.07291 0.0 10.5395   High
cufflinks 0.190625 0.0 0.828787 Low Low
cufflinks 1.02952 0.0 3.89367    
cufflinks 0.343275 0.0 1.41447 Low  
cufflinks 0.435548 0.0 1.76313 Low  
cufflinks 0.310553 0.0 1.29626 Low  
cufflinks 1.65624 0.0 6.03947   High

0 Strain