Gene : Phvul.008G154100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10072//PTHR10072:SF43 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1473
Name:  ? Phvul.008G154100 Secondary Identifier:  ? PAC:37160197
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G154100 0.5kb upstream 0.5kb upstream 26604 true Chr08: 32199890-32226493 Phaseolus vulgaris
Phvul.008G154100 0.5kb upstream 0.5kb upstream 500 false Chr08: 32225994-32226493 Phaseolus vulgaris
Phvul.008G154100 0.5kb downstream 0.5kb downstream 26604 true Chr08: 32199390-32225993 Phaseolus vulgaris
Phvul.008G154100 0.5kb downstream 0.5kb downstream 500 false Chr08: 32199390-32199889 Phaseolus vulgaris
Phvul.008G154100 1.0kb upstream 1.0kb upstream 27104 true Chr08: 32199890-32226993 Phaseolus vulgaris
Phvul.008G154100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32225994-32226993 Phaseolus vulgaris
Phvul.008G154100 1.0kb downstream 1.0kb downstream 27104 true Chr08: 32198890-32225993 Phaseolus vulgaris
Phvul.008G154100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32198890-32199889 Phaseolus vulgaris
Phvul.008G154100 2.0kb upstream 2.0kb upstream 28104 true Chr08: 32199890-32227993 Phaseolus vulgaris
Phvul.008G154100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32225994-32227993 Phaseolus vulgaris
Phvul.008G154100 2.0kb downstream 2.0kb downstream 28104 true Chr08: 32197890-32225993 Phaseolus vulgaris
Phvul.008G154100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32197890-32199889 Phaseolus vulgaris
Phvul.008G154100 5.0kb upstream 5.0kb upstream 31104 true Chr08: 32199890-32230993 Phaseolus vulgaris
Phvul.008G154100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32225994-32230993 Phaseolus vulgaris
Phvul.008G154100 5.0kb downstream 5.0kb downstream 31104 true Chr08: 32194890-32225993 Phaseolus vulgaris
Phvul.008G154100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32194890-32199889 Phaseolus vulgaris
Phvul.008G154100 10.0kb upstream 10.0kb upstream 36104 true Chr08: 32199890-32235993 Phaseolus vulgaris
Phvul.008G154100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32225994-32235993 Phaseolus vulgaris
Phvul.008G154100 10.0kb downstream 10.0kb downstream 36104 true Chr08: 32189890-32225993 Phaseolus vulgaris
Phvul.008G154100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32189890-32199889 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306107 5265 Fabidae View MSA
124068563 5270 Rosid View MSA
123740519 5271 Pentapetalae View MSA
122789049 5272 Eudicot View MSA
122045201 5273 Angiosperm View MSA
121346515 5274 Embryophyte View MSA
123424374 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.63704 0.0 23.061    
cufflinks 8.26609 0.0 22.2084    
cufflinks 39.7424 0.0 104.802 High High
cufflinks 7.93372 0.0 21.5273    
cufflinks 7.9176 0.0 21.4016    
cufflinks 18.7244 0.0 48.4198   High
cufflinks 4.67899 0.0 13.2024    
cufflinks 4.54248 0.0 12.8214   Low
cufflinks 5.07756 0.0 14.2654    
cufflinks 9.69715 0.0 25.7463    
cufflinks 7.23952 0.0 19.7101    

0 Strain