Gene : Phvul.008G146200 P. vulgaris v2.1
Defline:  (1 of 7) PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Genomic Order:  1499
Name:  ? Phvul.008G146200 Secondary Identifier:  ? PAC:37161363
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G146200 0.5kb upstream 0.5kb upstream 1421 true Chr08: 34023761-34025181 Phaseolus vulgaris
Phvul.008G146200 0.5kb upstream 0.5kb upstream 500 false Chr08: 34023761-34024260 Phaseolus vulgaris
Phvul.008G146200 0.5kb downstream 0.5kb downstream 1421 true Chr08: 34024261-34025681 Phaseolus vulgaris
Phvul.008G146200 0.5kb downstream 0.5kb downstream 500 false Chr08: 34025182-34025681 Phaseolus vulgaris
Phvul.008G146200 1.0kb upstream 1.0kb upstream 1921 true Chr08: 34023261-34025181 Phaseolus vulgaris
Phvul.008G146200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34023261-34024260 Phaseolus vulgaris
Phvul.008G146200 1.0kb downstream 1.0kb downstream 1921 true Chr08: 34024261-34026181 Phaseolus vulgaris
Phvul.008G146200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34025182-34026181 Phaseolus vulgaris
Phvul.008G146200 2.0kb upstream 2.0kb upstream 2921 true Chr08: 34022261-34025181 Phaseolus vulgaris
Phvul.008G146200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34022261-34024260 Phaseolus vulgaris
Phvul.008G146200 2.0kb downstream 2.0kb downstream 2921 true Chr08: 34024261-34027181 Phaseolus vulgaris
Phvul.008G146200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34025182-34027181 Phaseolus vulgaris
Phvul.008G146200 5.0kb upstream 5.0kb upstream 5921 true Chr08: 34019261-34025181 Phaseolus vulgaris
Phvul.008G146200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34019261-34024260 Phaseolus vulgaris
Phvul.008G146200 5.0kb downstream 5.0kb downstream 5921 true Chr08: 34024261-34030181 Phaseolus vulgaris
Phvul.008G146200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34025182-34030181 Phaseolus vulgaris
Phvul.008G146200 10.0kb upstream 10.0kb upstream 10921 true Chr08: 34014261-34025181 Phaseolus vulgaris
Phvul.008G146200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34014261-34024260 Phaseolus vulgaris
Phvul.008G146200 10.0kb downstream 10.0kb downstream 10921 true Chr08: 34024261-34035181 Phaseolus vulgaris
Phvul.008G146200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34025182-34035181 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255484 5265 Fabidae View MSA
124071554 5270 Rosid View MSA
123753637 5271 Pentapetalae View MSA
122796112 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0935275 0.0 0.463522 Low  
cufflinks 2.35838E-4 0.0 0.0103935 Low Low
cufflinks 0.153118 0.0 0.715171 Low  
cufflinks 0.166544 0.0 0.773618 Low  
cufflinks 0.15924 0.0 0.747718 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.29008E-4 0.0 0.00765428 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00128428 0.0 0.0254645 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00177728 0.0 0.0303749 Low  

0 Strain