Gene : Phvul.008G147000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  1493
Name:  ? Phvul.008G147000 Secondary Identifier:  ? PAC:37158954
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G147000 0.5kb upstream 0.5kb upstream 2171 true Chr08: 33647196-33649366 Phaseolus vulgaris
Phvul.008G147000 0.5kb upstream 0.5kb upstream 500 false Chr08: 33648867-33649366 Phaseolus vulgaris
Phvul.008G147000 0.5kb downstream 0.5kb downstream 2171 true Chr08: 33646696-33648866 Phaseolus vulgaris
Phvul.008G147000 0.5kb downstream 0.5kb downstream 500 false Chr08: 33646696-33647195 Phaseolus vulgaris
Phvul.008G147000 1.0kb upstream 1.0kb upstream 2671 true Chr08: 33647196-33649866 Phaseolus vulgaris
Phvul.008G147000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 33648867-33649866 Phaseolus vulgaris
Phvul.008G147000 1.0kb downstream 1.0kb downstream 2671 true Chr08: 33646196-33648866 Phaseolus vulgaris
Phvul.008G147000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 33646196-33647195 Phaseolus vulgaris
Phvul.008G147000 2.0kb upstream 2.0kb upstream 3671 true Chr08: 33647196-33650866 Phaseolus vulgaris
Phvul.008G147000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 33648867-33650866 Phaseolus vulgaris
Phvul.008G147000 2.0kb downstream 2.0kb downstream 3671 true Chr08: 33645196-33648866 Phaseolus vulgaris
Phvul.008G147000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 33645196-33647195 Phaseolus vulgaris
Phvul.008G147000 5.0kb upstream 5.0kb upstream 6671 true Chr08: 33647196-33653866 Phaseolus vulgaris
Phvul.008G147000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 33648867-33653866 Phaseolus vulgaris
Phvul.008G147000 5.0kb downstream 5.0kb downstream 6671 true Chr08: 33642196-33648866 Phaseolus vulgaris
Phvul.008G147000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 33642196-33647195 Phaseolus vulgaris
Phvul.008G147000 10.0kb upstream 10.0kb upstream 11671 true Chr08: 33647196-33658866 Phaseolus vulgaris
Phvul.008G147000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 33648867-33658866 Phaseolus vulgaris
Phvul.008G147000 10.0kb downstream 10.0kb downstream 11671 true Chr08: 33637196-33648866 Phaseolus vulgaris
Phvul.008G147000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 33637196-33647195 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312486 5265 Fabidae View MSA
124069004 5270 Rosid View MSA
123739785 5271 Pentapetalae View MSA
122796988 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0915518 0.0 0.385759 Low  
cufflinks 0.0339576 0.0 0.157421 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.19136 0.0 3.98852   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain