Gene : Phvul.008G150600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR18966//PTHR18966:SF202 - IONOTROPIC GLUTAMATE RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  1515
Name:  ? Phvul.008G150600 Secondary Identifier:  ? PAC:37157900
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G150600 0.5kb upstream 0.5kb upstream 2770 true Chr08: 35625645-35628414 Phaseolus vulgaris
Phvul.008G150600 0.5kb upstream 0.5kb upstream 500 false Chr08: 35625645-35626144 Phaseolus vulgaris
Phvul.008G150600 0.5kb downstream 0.5kb downstream 2770 true Chr08: 35626145-35628914 Phaseolus vulgaris
Phvul.008G150600 0.5kb downstream 0.5kb downstream 500 false Chr08: 35628415-35628914 Phaseolus vulgaris
Phvul.008G150600 1.0kb upstream 1.0kb upstream 3270 true Chr08: 35625145-35628414 Phaseolus vulgaris
Phvul.008G150600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 35625145-35626144 Phaseolus vulgaris
Phvul.008G150600 1.0kb downstream 1.0kb downstream 3270 true Chr08: 35626145-35629414 Phaseolus vulgaris
Phvul.008G150600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 35628415-35629414 Phaseolus vulgaris
Phvul.008G150600 2.0kb upstream 2.0kb upstream 4270 true Chr08: 35624145-35628414 Phaseolus vulgaris
Phvul.008G150600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 35624145-35626144 Phaseolus vulgaris
Phvul.008G150600 2.0kb downstream 2.0kb downstream 4270 true Chr08: 35626145-35630414 Phaseolus vulgaris
Phvul.008G150600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 35628415-35630414 Phaseolus vulgaris
Phvul.008G150600 5.0kb upstream 5.0kb upstream 7270 true Chr08: 35621145-35628414 Phaseolus vulgaris
Phvul.008G150600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 35621145-35626144 Phaseolus vulgaris
Phvul.008G150600 5.0kb downstream 5.0kb downstream 7270 true Chr08: 35626145-35633414 Phaseolus vulgaris
Phvul.008G150600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 35628415-35633414 Phaseolus vulgaris
Phvul.008G150600 10.0kb upstream 10.0kb upstream 12270 true Chr08: 35616145-35628414 Phaseolus vulgaris
Phvul.008G150600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 35616145-35626144 Phaseolus vulgaris
Phvul.008G150600 10.0kb downstream 10.0kb downstream 12270 true Chr08: 35626145-35638414 Phaseolus vulgaris
Phvul.008G150600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 35628415-35638414 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657782 5273 Angiosperm View MSA
122296357 5265 Fabidae View MSA
124040123 5270 Rosid View MSA
123611690 5271 Pentapetalae View MSA
122646240 5272 Eudicot View MSA
120929812 5274 Embryophyte View MSA
122970365 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.48282 0.0 6.70008    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain