Gene : Phvul.008G149300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  1577
Name:  ? Phvul.008G149300 Secondary Identifier:  ? PAC:37160034
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G149300 0.5kb upstream 0.5kb upstream 16527 true Chr08: 42759728-42776254 Phaseolus vulgaris
Phvul.008G149300 0.5kb upstream 0.5kb upstream 500 false Chr08: 42775755-42776254 Phaseolus vulgaris
Phvul.008G149300 0.5kb downstream 0.5kb downstream 16527 true Chr08: 42759228-42775754 Phaseolus vulgaris
Phvul.008G149300 0.5kb downstream 0.5kb downstream 500 false Chr08: 42759228-42759727 Phaseolus vulgaris
Phvul.008G149300 1.0kb upstream 1.0kb upstream 17027 true Chr08: 42759728-42776754 Phaseolus vulgaris
Phvul.008G149300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42775755-42776754 Phaseolus vulgaris
Phvul.008G149300 1.0kb downstream 1.0kb downstream 17027 true Chr08: 42758728-42775754 Phaseolus vulgaris
Phvul.008G149300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42758728-42759727 Phaseolus vulgaris
Phvul.008G149300 2.0kb upstream 2.0kb upstream 18027 true Chr08: 42759728-42777754 Phaseolus vulgaris
Phvul.008G149300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42775755-42777754 Phaseolus vulgaris
Phvul.008G149300 2.0kb downstream 2.0kb downstream 18027 true Chr08: 42757728-42775754 Phaseolus vulgaris
Phvul.008G149300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42757728-42759727 Phaseolus vulgaris
Phvul.008G149300 5.0kb upstream 5.0kb upstream 21027 true Chr08: 42759728-42780754 Phaseolus vulgaris
Phvul.008G149300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42775755-42780754 Phaseolus vulgaris
Phvul.008G149300 5.0kb downstream 5.0kb downstream 21027 true Chr08: 42754728-42775754 Phaseolus vulgaris
Phvul.008G149300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42754728-42759727 Phaseolus vulgaris
Phvul.008G149300 10.0kb upstream 10.0kb upstream 26027 true Chr08: 42759728-42785754 Phaseolus vulgaris
Phvul.008G149300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42775755-42785754 Phaseolus vulgaris
Phvul.008G149300 10.0kb downstream 10.0kb downstream 26027 true Chr08: 42749728-42775754 Phaseolus vulgaris
Phvul.008G149300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42749728-42759727 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309617 5265 Fabidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.90774 0.0 16.7961   High
cufflinks 3.22759 0.0 12.3776   Low
cufflinks 3.80899 0.0 19.6814    
cufflinks 2.98571 0.0 12.0606   Low
cufflinks 3.86828 0.0 14.2116   High
cufflinks 3.92836 0.0 21.7393   High
cufflinks 3.4529 0.0 12.8513    
cufflinks 3.29045 0.0 17.3414    
cufflinks 3.47611 0.0 13.0444    
cufflinks 3.49894 0.0 13.2484    
cufflinks 3.55201 0.0 12.9347    

0 Strain