Gene : Phvul.008G151600 P. vulgaris v2.1
Genomic Order:  1559 Name:  ? Phvul.008G151600
Secondary Identifier:  ? PAC:37157942
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G151600 0.5kb upstream 0.5kb upstream 1942 true Chr08: 41551790-41553731 Phaseolus vulgaris
Phvul.008G151600 0.5kb upstream 0.5kb upstream 500 false Chr08: 41551790-41552289 Phaseolus vulgaris
Phvul.008G151600 0.5kb downstream 0.5kb downstream 1942 true Chr08: 41552290-41554231 Phaseolus vulgaris
Phvul.008G151600 0.5kb downstream 0.5kb downstream 500 false Chr08: 41553732-41554231 Phaseolus vulgaris
Phvul.008G151600 1.0kb upstream 1.0kb upstream 2442 true Chr08: 41551290-41553731 Phaseolus vulgaris
Phvul.008G151600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41551290-41552289 Phaseolus vulgaris
Phvul.008G151600 1.0kb downstream 1.0kb downstream 2442 true Chr08: 41552290-41554731 Phaseolus vulgaris
Phvul.008G151600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41553732-41554731 Phaseolus vulgaris
Phvul.008G151600 2.0kb upstream 2.0kb upstream 3442 true Chr08: 41550290-41553731 Phaseolus vulgaris
Phvul.008G151600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41550290-41552289 Phaseolus vulgaris
Phvul.008G151600 2.0kb downstream 2.0kb downstream 3442 true Chr08: 41552290-41555731 Phaseolus vulgaris
Phvul.008G151600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41553732-41555731 Phaseolus vulgaris
Phvul.008G151600 5.0kb upstream 5.0kb upstream 6442 true Chr08: 41547290-41553731 Phaseolus vulgaris
Phvul.008G151600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41547290-41552289 Phaseolus vulgaris
Phvul.008G151600 5.0kb downstream 5.0kb downstream 6442 true Chr08: 41552290-41558731 Phaseolus vulgaris
Phvul.008G151600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41553732-41558731 Phaseolus vulgaris
Phvul.008G151600 10.0kb upstream 10.0kb upstream 11442 true Chr08: 41542290-41553731 Phaseolus vulgaris
Phvul.008G151600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41542290-41552289 Phaseolus vulgaris
Phvul.008G151600 10.0kb downstream 10.0kb downstream 11442 true Chr08: 41552290-41563731 Phaseolus vulgaris
Phvul.008G151600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41553732-41563731 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041158 5273 Angiosperm View MSA
122311729 5265 Fabidae View MSA
124074224 5270 Rosid View MSA
123741872 5271 Pentapetalae View MSA
122795548 5272 Eudicot View MSA
121309806 5274 Embryophyte View MSA
123347460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.460594 0.0 1.74382   Low
cufflinks 0.385607 0.0 1.4811 Low Low
cufflinks 0.787761 0.0 2.85887    
cufflinks 0.822378 0.0 2.97011    
cufflinks 0.996414 0.0 3.55114   High
cufflinks 0.844469 0.0 3.03513    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.500838 0.0 1.88661    
cufflinks 0.796399 0.0 2.87818    

0 Strain