Gene : Phvul.008G138100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24221:SF141 - ABC TRANSPORTER B FAMILY MEMBER 15-RELATED Genomic Order:  1440
Name:  ? Phvul.008G138100 Secondary Identifier:  ? PAC:37158302
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G138100 0.5kb upstream 0.5kb upstream 8344 true Chr08: 29860452-29868795 Phaseolus vulgaris
Phvul.008G138100 0.5kb upstream 0.5kb upstream 500 false Chr08: 29860452-29860951 Phaseolus vulgaris
Phvul.008G138100 0.5kb downstream 0.5kb downstream 8344 true Chr08: 29860952-29869295 Phaseolus vulgaris
Phvul.008G138100 0.5kb downstream 0.5kb downstream 500 false Chr08: 29868796-29869295 Phaseolus vulgaris
Phvul.008G138100 1.0kb upstream 1.0kb upstream 8844 true Chr08: 29859952-29868795 Phaseolus vulgaris
Phvul.008G138100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 29859952-29860951 Phaseolus vulgaris
Phvul.008G138100 1.0kb downstream 1.0kb downstream 8844 true Chr08: 29860952-29869795 Phaseolus vulgaris
Phvul.008G138100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 29868796-29869795 Phaseolus vulgaris
Phvul.008G138100 2.0kb upstream 2.0kb upstream 9844 true Chr08: 29858952-29868795 Phaseolus vulgaris
Phvul.008G138100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 29858952-29860951 Phaseolus vulgaris
Phvul.008G138100 2.0kb downstream 2.0kb downstream 9844 true Chr08: 29860952-29870795 Phaseolus vulgaris
Phvul.008G138100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 29868796-29870795 Phaseolus vulgaris
Phvul.008G138100 5.0kb upstream 5.0kb upstream 12844 true Chr08: 29855952-29868795 Phaseolus vulgaris
Phvul.008G138100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 29855952-29860951 Phaseolus vulgaris
Phvul.008G138100 5.0kb downstream 5.0kb downstream 12844 true Chr08: 29860952-29873795 Phaseolus vulgaris
Phvul.008G138100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 29868796-29873795 Phaseolus vulgaris
Phvul.008G138100 10.0kb upstream 10.0kb upstream 17844 true Chr08: 29850952-29868795 Phaseolus vulgaris
Phvul.008G138100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 29850952-29860951 Phaseolus vulgaris
Phvul.008G138100 10.0kb downstream 10.0kb downstream 17844 true Chr08: 29860952-29878795 Phaseolus vulgaris
Phvul.008G138100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 29868796-29878795 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310671 5265 Fabidae View MSA
124072133 5270 Rosid View MSA
123745153 5271 Pentapetalae View MSA
122796432 5272 Eudicot View MSA
122043732 5273 Angiosperm View MSA
121347881 5274 Embryophyte View MSA
123380663 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.711631 0.0 2.95002   Low
cufflinks 1.77567 0.0 5.87526    
cufflinks 3.10843 0.0 10.8664    
cufflinks 0.573351 0.0 1.97578   Low
cufflinks 17.8467 0.0 61.7569   High
cufflinks 3.29744 0.0 11.3114    
cufflinks 4.09103 0.0 14.8566    
cufflinks 4.94648 0.0 15.9642    
cufflinks 5.4718 0.0 17.4798    
cufflinks 1.5498 0.0 6.24154    
cufflinks 10.2217 0.0 36.5362   High

0 Strain