Gene : Phvul.008G141500 P. vulgaris v2.1
Defline:  (1 of 1) KOG0385 - Chromatin remodeling complex WSTF-ISWI, small subunit Genomic Order:  1543
Name:  ? Phvul.008G141500 Secondary Identifier:  ? PAC:37158390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G141500 0.5kb upstream 0.5kb upstream 35103 true Chr08: 38526012-38561114 Phaseolus vulgaris
Phvul.008G141500 0.5kb upstream 0.5kb upstream 500 false Chr08: 38560615-38561114 Phaseolus vulgaris
Phvul.008G141500 0.5kb downstream 0.5kb downstream 35103 true Chr08: 38525512-38560614 Phaseolus vulgaris
Phvul.008G141500 0.5kb downstream 0.5kb downstream 500 false Chr08: 38525512-38526011 Phaseolus vulgaris
Phvul.008G141500 1.0kb upstream 1.0kb upstream 35603 true Chr08: 38526012-38561614 Phaseolus vulgaris
Phvul.008G141500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 38560615-38561614 Phaseolus vulgaris
Phvul.008G141500 1.0kb downstream 1.0kb downstream 35603 true Chr08: 38525012-38560614 Phaseolus vulgaris
Phvul.008G141500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 38525012-38526011 Phaseolus vulgaris
Phvul.008G141500 2.0kb upstream 2.0kb upstream 36603 true Chr08: 38526012-38562614 Phaseolus vulgaris
Phvul.008G141500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 38560615-38562614 Phaseolus vulgaris
Phvul.008G141500 2.0kb downstream 2.0kb downstream 36603 true Chr08: 38524012-38560614 Phaseolus vulgaris
Phvul.008G141500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 38524012-38526011 Phaseolus vulgaris
Phvul.008G141500 5.0kb upstream 5.0kb upstream 39603 true Chr08: 38526012-38565614 Phaseolus vulgaris
Phvul.008G141500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 38560615-38565614 Phaseolus vulgaris
Phvul.008G141500 5.0kb downstream 5.0kb downstream 39603 true Chr08: 38521012-38560614 Phaseolus vulgaris
Phvul.008G141500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 38521012-38526011 Phaseolus vulgaris
Phvul.008G141500 10.0kb upstream 10.0kb upstream 44603 true Chr08: 38526012-38570614 Phaseolus vulgaris
Phvul.008G141500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 38560615-38570614 Phaseolus vulgaris
Phvul.008G141500 10.0kb downstream 10.0kb downstream 44603 true Chr08: 38516012-38560614 Phaseolus vulgaris
Phvul.008G141500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 38516012-38526011 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
122252595 5265 Fabidae Singleton cluster - no MSA
124063375 5270 Rosid View MSA
123740269 5271 Pentapetalae View MSA
122792604 5272 Eudicot View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06076 0.0 14.6279   Low
cufflinks 4.53816 0.0 18.1332   High
cufflinks 1.91798 0.0 11.8495   Low
cufflinks 2.43628 0.0 12.3376    
cufflinks 2.94003 0.0 15.8652    
cufflinks 3.6824 0.0 22.0843    
cufflinks 3.52266 0.0 26.1386    
cufflinks 3.92076 0.0 24.4668    
cufflinks 4.79862 0.0 24.4427   High
cufflinks 4.07332 0.0 23.7685    
cufflinks 3.86225 0.0 23.9053    

0 Strain