Gene : Phvul.008G143600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24073:SF578 - RAS-RELATED PROTEIN RABA4D Genomic Order:  1461
Name:  ? Phvul.008G143600 Secondary Identifier:  ? PAC:37160097
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G143600 0.5kb upstream 0.5kb upstream 3408 true Chr08: 30881018-30884425 Phaseolus vulgaris
Phvul.008G143600 0.5kb upstream 0.5kb upstream 500 false Chr08: 30881018-30881517 Phaseolus vulgaris
Phvul.008G143600 0.5kb downstream 0.5kb downstream 3408 true Chr08: 30881518-30884925 Phaseolus vulgaris
Phvul.008G143600 0.5kb downstream 0.5kb downstream 500 false Chr08: 30884426-30884925 Phaseolus vulgaris
Phvul.008G143600 1.0kb upstream 1.0kb upstream 3908 true Chr08: 30880518-30884425 Phaseolus vulgaris
Phvul.008G143600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 30880518-30881517 Phaseolus vulgaris
Phvul.008G143600 1.0kb downstream 1.0kb downstream 3908 true Chr08: 30881518-30885425 Phaseolus vulgaris
Phvul.008G143600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 30884426-30885425 Phaseolus vulgaris
Phvul.008G143600 2.0kb upstream 2.0kb upstream 4908 true Chr08: 30879518-30884425 Phaseolus vulgaris
Phvul.008G143600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 30879518-30881517 Phaseolus vulgaris
Phvul.008G143600 2.0kb downstream 2.0kb downstream 4908 true Chr08: 30881518-30886425 Phaseolus vulgaris
Phvul.008G143600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 30884426-30886425 Phaseolus vulgaris
Phvul.008G143600 5.0kb upstream 5.0kb upstream 7908 true Chr08: 30876518-30884425 Phaseolus vulgaris
Phvul.008G143600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 30876518-30881517 Phaseolus vulgaris
Phvul.008G143600 5.0kb downstream 5.0kb downstream 7908 true Chr08: 30881518-30889425 Phaseolus vulgaris
Phvul.008G143600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 30884426-30889425 Phaseolus vulgaris
Phvul.008G143600 10.0kb upstream 10.0kb upstream 12908 true Chr08: 30871518-30884425 Phaseolus vulgaris
Phvul.008G143600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 30871518-30881517 Phaseolus vulgaris
Phvul.008G143600 10.0kb downstream 10.0kb downstream 12908 true Chr08: 30881518-30894425 Phaseolus vulgaris
Phvul.008G143600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 30884426-30894425 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314261 5265 Fabidae View MSA
124065082 5270 Rosid View MSA
123746606 5271 Pentapetalae View MSA
122786113 5272 Eudicot View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.88782 0.0 9.27875   High
cufflinks 0.200327 0.0 0.825145 Low Low
cufflinks 0.161355 0.0 0.677479 Low Low
cufflinks 2.22077 0.0 7.43482    
cufflinks 0.323608 0.0 1.28947 Low  
cufflinks 0.317926 0.0 1.26305 Low  
cufflinks 2.41387 0.0 7.93886   High
cufflinks 1.72702 0.0 5.8856    
cufflinks 2.28849 0.0 7.59255    
cufflinks 0.692072 0.0 2.58607    
cufflinks 0.569569 0.0 2.16738    

0 Strain