Gene : Phvul.008G142100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31808:SF2 - F21O3.2 PROTEIN-RELATED Genomic Order:  1339
Name:  ? Phvul.008G142100 Secondary Identifier:  ? PAC:37160111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G142100 0.5kb upstream 0.5kb upstream 3630 true Chr08: 21972513-21976142 Phaseolus vulgaris
Phvul.008G142100 0.5kb upstream 0.5kb upstream 500 false Chr08: 21975643-21976142 Phaseolus vulgaris
Phvul.008G142100 0.5kb downstream 0.5kb downstream 3630 true Chr08: 21972013-21975642 Phaseolus vulgaris
Phvul.008G142100 0.5kb downstream 0.5kb downstream 500 false Chr08: 21972013-21972512 Phaseolus vulgaris
Phvul.008G142100 1.0kb upstream 1.0kb upstream 4130 true Chr08: 21972513-21976642 Phaseolus vulgaris
Phvul.008G142100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21975643-21976642 Phaseolus vulgaris
Phvul.008G142100 1.0kb downstream 1.0kb downstream 4130 true Chr08: 21971513-21975642 Phaseolus vulgaris
Phvul.008G142100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21971513-21972512 Phaseolus vulgaris
Phvul.008G142100 2.0kb upstream 2.0kb upstream 5130 true Chr08: 21972513-21977642 Phaseolus vulgaris
Phvul.008G142100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21975643-21977642 Phaseolus vulgaris
Phvul.008G142100 2.0kb downstream 2.0kb downstream 5130 true Chr08: 21970513-21975642 Phaseolus vulgaris
Phvul.008G142100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21970513-21972512 Phaseolus vulgaris
Phvul.008G142100 5.0kb upstream 5.0kb upstream 8130 true Chr08: 21972513-21980642 Phaseolus vulgaris
Phvul.008G142100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21975643-21980642 Phaseolus vulgaris
Phvul.008G142100 5.0kb downstream 5.0kb downstream 8130 true Chr08: 21967513-21975642 Phaseolus vulgaris
Phvul.008G142100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21967513-21972512 Phaseolus vulgaris
Phvul.008G142100 10.0kb upstream 10.0kb upstream 13130 true Chr08: 21972513-21985642 Phaseolus vulgaris
Phvul.008G142100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21975643-21985642 Phaseolus vulgaris
Phvul.008G142100 10.0kb downstream 10.0kb downstream 13130 true Chr08: 21962513-21975642 Phaseolus vulgaris
Phvul.008G142100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21962513-21972512 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255066 5265 Fabidae View MSA
123996949 5270 Rosid View MSA
123742613 5271 Pentapetalae View MSA
122790300 5272 Eudicot View MSA
122047287 5273 Angiosperm View MSA
121310722 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 99.2001 0.0 273.536 High High
cufflinks 5.56395 0.0 16.0378    
cufflinks 24.7901 0.0 64.1459   High
cufflinks 4.62595 0.0 13.7022    
cufflinks 3.69231 0.0 11.1946    
cufflinks 11.2222 0.0 30.3059    
cufflinks 1.51616 0.0 5.06462   Low
cufflinks 1.54159 0.0 5.12516   Low
cufflinks 2.3608 0.0 7.52265    
cufflinks 8.43576 0.0 23.3749    
cufflinks 1.65936 0.0 5.50466    

0 Strain