Gene : Phvul.008G145726 P. vulgaris v2.1
Defline:  (1 of 1) 1.3.5.1//1.3.99.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase Genomic Order:  1505
Name:  ? Phvul.008G145726 Secondary Identifier:  ? PAC:37161390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3781 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4302 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5690 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G145726 0.5kb upstream 0.5kb upstream 4876 true Chr08: 34590964-34595839 Phaseolus vulgaris
Phvul.008G145726 0.5kb upstream 0.5kb upstream 500 false Chr08: 34595340-34595839 Phaseolus vulgaris
Phvul.008G145726 0.5kb downstream 0.5kb downstream 4876 true Chr08: 34590464-34595339 Phaseolus vulgaris
Phvul.008G145726 0.5kb downstream 0.5kb downstream 500 false Chr08: 34590464-34590963 Phaseolus vulgaris
Phvul.008G145726 1.0kb upstream 1.0kb upstream 5376 true Chr08: 34590964-34596339 Phaseolus vulgaris
Phvul.008G145726 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34595340-34596339 Phaseolus vulgaris
Phvul.008G145726 1.0kb downstream 1.0kb downstream 5376 true Chr08: 34589964-34595339 Phaseolus vulgaris
Phvul.008G145726 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34589964-34590963 Phaseolus vulgaris
Phvul.008G145726 2.0kb upstream 2.0kb upstream 6376 true Chr08: 34590964-34597339 Phaseolus vulgaris
Phvul.008G145726 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34595340-34597339 Phaseolus vulgaris
Phvul.008G145726 2.0kb downstream 2.0kb downstream 6376 true Chr08: 34588964-34595339 Phaseolus vulgaris
Phvul.008G145726 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34588964-34590963 Phaseolus vulgaris
Phvul.008G145726 5.0kb upstream 5.0kb upstream 9376 true Chr08: 34590964-34600339 Phaseolus vulgaris
Phvul.008G145726 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34595340-34600339 Phaseolus vulgaris
Phvul.008G145726 5.0kb downstream 5.0kb downstream 9376 true Chr08: 34585964-34595339 Phaseolus vulgaris
Phvul.008G145726 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34585964-34590963 Phaseolus vulgaris
Phvul.008G145726 10.0kb upstream 10.0kb upstream 14376 true Chr08: 34590964-34605339 Phaseolus vulgaris
Phvul.008G145726 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34595340-34605339 Phaseolus vulgaris
Phvul.008G145726 10.0kb downstream 10.0kb downstream 14376 true Chr08: 34580964-34595339 Phaseolus vulgaris
Phvul.008G145726 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34580964-34590963 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299788 5265 Fabidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 125.539 0.0 351.853 High High
cufflinks 75.953 0.0 203.017 High  
cufflinks 52.7873 0.0 137.673 High Low
cufflinks 138.396 0.0 395.579 High High
cufflinks 82.8692 0.0 224.499 High  
cufflinks 77.8657 0.0 208.515 High  
cufflinks 57.9147 0.0 152.749 High Low
cufflinks 58.6407 0.0 154.044 High Low
cufflinks 84.5196 0.0 229.739 High  
cufflinks 86.6644 0.0 234.784 High  
cufflinks 104.965 0.0 290.723 High  

0 Strain