Gene : Phvul.008G130600 P. vulgaris v2.1
Defline:  (1 of 3) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  1314
Name:  ? Phvul.008G130600 Secondary Identifier:  ? PAC:37161132
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G130600 0.5kb upstream 0.5kb upstream 6748 true Chr08: 21188955-21195702 Phaseolus vulgaris
Phvul.008G130600 0.5kb upstream 0.5kb upstream 500 false Chr08: 21188955-21189454 Phaseolus vulgaris
Phvul.008G130600 0.5kb downstream 0.5kb downstream 6748 true Chr08: 21189455-21196202 Phaseolus vulgaris
Phvul.008G130600 0.5kb downstream 0.5kb downstream 500 false Chr08: 21195703-21196202 Phaseolus vulgaris
Phvul.008G130600 1.0kb upstream 1.0kb upstream 7248 true Chr08: 21188455-21195702 Phaseolus vulgaris
Phvul.008G130600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21188455-21189454 Phaseolus vulgaris
Phvul.008G130600 1.0kb downstream 1.0kb downstream 7248 true Chr08: 21189455-21196702 Phaseolus vulgaris
Phvul.008G130600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21195703-21196702 Phaseolus vulgaris
Phvul.008G130600 2.0kb upstream 2.0kb upstream 8248 true Chr08: 21187455-21195702 Phaseolus vulgaris
Phvul.008G130600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21187455-21189454 Phaseolus vulgaris
Phvul.008G130600 2.0kb downstream 2.0kb downstream 8248 true Chr08: 21189455-21197702 Phaseolus vulgaris
Phvul.008G130600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21195703-21197702 Phaseolus vulgaris
Phvul.008G130600 5.0kb upstream 5.0kb upstream 11248 true Chr08: 21184455-21195702 Phaseolus vulgaris
Phvul.008G130600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21184455-21189454 Phaseolus vulgaris
Phvul.008G130600 5.0kb downstream 5.0kb downstream 11248 true Chr08: 21189455-21200702 Phaseolus vulgaris
Phvul.008G130600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21195703-21200702 Phaseolus vulgaris
Phvul.008G130600 10.0kb upstream 10.0kb upstream 16248 true Chr08: 21179455-21195702 Phaseolus vulgaris
Phvul.008G130600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21179455-21189454 Phaseolus vulgaris
Phvul.008G130600 10.0kb downstream 10.0kb downstream 16248 true Chr08: 21189455-21205702 Phaseolus vulgaris
Phvul.008G130600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21195703-21205702 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0638 0.0 54.4506    
cufflinks 9.93969 0.0 42.2565    
cufflinks 3.91444 0.0 15.4398   Low
cufflinks 12.1893 0.0 38.3828    
cufflinks 11.0604 0.0 45.2789    
cufflinks 4.97537 0.0 17.873   Low
cufflinks 10.4221 0.0 37.42    
cufflinks 8.80613 0.0 36.795    
cufflinks 11.7666 0.0 40.9315    
cufflinks 17.7573 0.0 67.3147   High
cufflinks 11.914 0.0 41.8929    

0 Strain