Gene : Phvul.008G130200 P. vulgaris v2.1
Defline:  (1 of 3) K14819 - dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] (DUSP12, YVH1) Genomic Order:  1310
Name:  ? Phvul.008G130200 Secondary Identifier:  ? PAC:37157931
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G130200 0.5kb upstream 0.5kb upstream 2157 true Chr08: 21116118-21118274 Phaseolus vulgaris
Phvul.008G130200 0.5kb upstream 0.5kb upstream 500 false Chr08: 21116118-21116617 Phaseolus vulgaris
Phvul.008G130200 0.5kb downstream 0.5kb downstream 2157 true Chr08: 21116618-21118774 Phaseolus vulgaris
Phvul.008G130200 0.5kb downstream 0.5kb downstream 500 false Chr08: 21118275-21118774 Phaseolus vulgaris
Phvul.008G130200 1.0kb upstream 1.0kb upstream 2657 true Chr08: 21115618-21118274 Phaseolus vulgaris
Phvul.008G130200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21115618-21116617 Phaseolus vulgaris
Phvul.008G130200 1.0kb downstream 1.0kb downstream 2657 true Chr08: 21116618-21119274 Phaseolus vulgaris
Phvul.008G130200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21118275-21119274 Phaseolus vulgaris
Phvul.008G130200 2.0kb upstream 2.0kb upstream 3657 true Chr08: 21114618-21118274 Phaseolus vulgaris
Phvul.008G130200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21114618-21116617 Phaseolus vulgaris
Phvul.008G130200 2.0kb downstream 2.0kb downstream 3657 true Chr08: 21116618-21120274 Phaseolus vulgaris
Phvul.008G130200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21118275-21120274 Phaseolus vulgaris
Phvul.008G130200 5.0kb upstream 5.0kb upstream 6657 true Chr08: 21111618-21118274 Phaseolus vulgaris
Phvul.008G130200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21111618-21116617 Phaseolus vulgaris
Phvul.008G130200 5.0kb downstream 5.0kb downstream 6657 true Chr08: 21116618-21123274 Phaseolus vulgaris
Phvul.008G130200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21118275-21123274 Phaseolus vulgaris
Phvul.008G130200 10.0kb upstream 10.0kb upstream 11657 true Chr08: 21106618-21118274 Phaseolus vulgaris
Phvul.008G130200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21106618-21116617 Phaseolus vulgaris
Phvul.008G130200 10.0kb downstream 10.0kb downstream 11657 true Chr08: 21116618-21128274 Phaseolus vulgaris
Phvul.008G130200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21118275-21128274 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
122297660 5265 Fabidae View MSA
124050385 5270 Rosid View MSA
123750058 5271 Pentapetalae View MSA
122788963 5272 Eudicot View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09334 0.0 13.1711    
cufflinks 0.795951 0.0 6.56114    
cufflinks 0.178007 0.0 1.93507 Low Low
cufflinks 1.28758 0.0 9.91863    
cufflinks 0.832275 0.0 13.0542    
cufflinks 0.392521 0.0 3.43781 Low Low
cufflinks 0.65558 0.0 7.77651    
cufflinks 2.0713 0.0 11.9476   High
cufflinks 1.08896 0.0 7.59452    
cufflinks 1.70178 0.0 13.6063   High
cufflinks 0.871222 0.0 12.0211    

0 Strain