Gene : Phvul.008G130400 P. vulgaris v2.1
Defline:  (1 of 1) K05291 - phosphatidylinositol glycan, class S (PIGS) Genomic Order:  1312
Name:  ? Phvul.008G130400 Secondary Identifier:  ? PAC:37158932
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G130400 0.5kb upstream 0.5kb upstream 11016 true Chr08: 21144852-21155867 Phaseolus vulgaris
Phvul.008G130400 0.5kb upstream 0.5kb upstream 500 false Chr08: 21155368-21155867 Phaseolus vulgaris
Phvul.008G130400 0.5kb downstream 0.5kb downstream 11016 true Chr08: 21144352-21155367 Phaseolus vulgaris
Phvul.008G130400 0.5kb downstream 0.5kb downstream 500 false Chr08: 21144352-21144851 Phaseolus vulgaris
Phvul.008G130400 1.0kb upstream 1.0kb upstream 11516 true Chr08: 21144852-21156367 Phaseolus vulgaris
Phvul.008G130400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21155368-21156367 Phaseolus vulgaris
Phvul.008G130400 1.0kb downstream 1.0kb downstream 11516 true Chr08: 21143852-21155367 Phaseolus vulgaris
Phvul.008G130400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21143852-21144851 Phaseolus vulgaris
Phvul.008G130400 2.0kb upstream 2.0kb upstream 12516 true Chr08: 21144852-21157367 Phaseolus vulgaris
Phvul.008G130400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21155368-21157367 Phaseolus vulgaris
Phvul.008G130400 2.0kb downstream 2.0kb downstream 12516 true Chr08: 21142852-21155367 Phaseolus vulgaris
Phvul.008G130400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21142852-21144851 Phaseolus vulgaris
Phvul.008G130400 5.0kb upstream 5.0kb upstream 15516 true Chr08: 21144852-21160367 Phaseolus vulgaris
Phvul.008G130400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21155368-21160367 Phaseolus vulgaris
Phvul.008G130400 5.0kb downstream 5.0kb downstream 15516 true Chr08: 21139852-21155367 Phaseolus vulgaris
Phvul.008G130400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21139852-21144851 Phaseolus vulgaris
Phvul.008G130400 10.0kb upstream 10.0kb upstream 20516 true Chr08: 21144852-21165367 Phaseolus vulgaris
Phvul.008G130400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21155368-21165367 Phaseolus vulgaris
Phvul.008G130400 10.0kb downstream 10.0kb downstream 20516 true Chr08: 21134852-21155367 Phaseolus vulgaris
Phvul.008G130400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21134852-21144851 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301678 5265 Fabidae View MSA
124066381 5270 Rosid View MSA
123740314 5271 Pentapetalae View MSA
122787457 5272 Eudicot View MSA
122046562 5273 Angiosperm View MSA
121348153 5274 Embryophyte View MSA
123426160 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.2487 0.0 19.4169   Low
cufflinks 11.4595 0.0 29.8893    
cufflinks 16.4442 0.0 42.5299    
cufflinks 10.9749 0.0 28.7857    
cufflinks 15.0589 0.0 38.9836    
cufflinks 8.75917 0.0 23.1954   Low
cufflinks 14.5027 0.0 37.5319    
cufflinks 14.3523 0.0 37.1684    
cufflinks 19.4626 0.0 50.3238   High
cufflinks 11.774 0.0 30.6736    
cufflinks 12.8234 0.0 33.2946    

0 Strain